Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc55g00011 ATGACTAGCTACCCTTGGAACTACTCACATGATCCTTGTTTTGATGATGATGGAAAATGGGCCACTAAGCTTCTTATGGAGTGTGCTAGAGCAATCAACGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAATTAGCTTCCCCTTATGGAGATTCTGAGCAGAGACTAGCCTCATATTTTCTTCAAGCTCTGTTCTGCAAAGCCACTCAAACCGGCGAAAGATGCTACATGGCTCTTAAATCAGTATCTGAAAAGAACCAATCCTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTGAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGCTGCAATCTTGGAAGCATTTTTAGAAACAGGAGAGGAAAACAGAAAGAAGAAGCTTCACATCATTGACATAAGCAACAACACTAGCACACTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGACTAGTGTTCATGTTGAAACCCCTCAAGTGAAGCTCACAGTTGTGTTGGTGAAAGAAAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTAAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTGCCCTTTGAGATTAACATGATAAATGGTGTGGAACATCTATGGATGGTGACAAAAGAAGAGTTAGGAGTGGTTGAAGAAGAAGAAGAAGATGATGAGGCTGTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGAAGGGAAAAAGGGGTAATGTGATTGGAATGTTGAAGTCTCTTAATCCAAGAATTGTGACAATTGTTGAGGAAGAAAGTGGTGATTCTTGCATCACAAGAAATGATGATGATGATGATGATAGTGATAGTGATGGTTTTGTGAAGTGCTTTGAAGAGTGTTTGAGGTTTTACAAGATTTACTTTGATATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAGAAATTGATGCTAGAGAGGGAGTGTTCAAGAAACATACTTAGTGTTTTGAGTTGCAATGATAATAATAGTAGTAGTGATCATAGAAGGGAGAGAGGAGTGGAGTGGTCTATGAGGTTTAGGGAGTATTTTATACCAATAAGTTTGAGTGATGATGTTGTGGATGATGTTAAGGCATTGATTAAGAGATATAATAGATCAAGGTGGTCATTGATGATGTCATCATTATCATCATCATCATCATCATCACAAGTAGAAGGAATTTACTTGAAATGGAGTGATGAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1296 0.3866 MTSYPWNYSHDPCFDDDGKWATKLLMECARAINDRDSSKIQHLLWMLNELASPYGDSEQRLASYFLQALFCKATQTGERCYMALKSVSEKNQSFDSARKMILKFQEVSPWTTFGHVASNAAILEAFLETGEENRKKKLHIIDISNNTSTLCTQWPTFLESLATKTSVHVETPQVKLTVVLVKESLKGSVMNEICKRMEKFARLMRVPFEINMINGVEHLWMVTKEELGVVEEEEEDDEAVIAVNCVGGLRRVEKGKRGNVIGMLKSLNPRIVTIVEEESGDSCITRNDDDDDDSDSDGFVKCFEECLRFYKIYFDMLEESFPTISNEKLMLERECSRNILSVLSCNDNNSSSDHRRERGVEWSMRFREYFIPISLSDDVVDDVKALIKRYNRSRWSLMMSSLSSSSSSSQVEGIYLKWSDEPVLWASAWKP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc55g00011 431 Pfam GRAS domain family 22 430 IPR005202 -
Stsc55g00011 431 ProSiteProfiles GRAS family profile. 12 430 IPR005202 -
Stsc55g00011 431 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 419 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc55g00011 Stsc-Chr55 47179 48474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc55g00011 12 431 GRAS Transcription Factor Family AT4G37650 45.727 2.31e-120 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc55g00011 GRAS 1.2e-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc55g00011 - - adu:107477059 669.848