Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc55g00006 ATGAATAACTTAAACCCGAAACACAAAGTTAATGGCTCGCTACAAGAATTGAGCGCCGCTGACATGGGAAATTGCTTGGTCCCTAGACCATCTGCTTGGTCGCTTGATGAGAAAATGCTGAGGGCTCTGTCCTTCTTTAAGGAATCAGCTGGTGGTGGAATATTGGCACAAGTTTGGGTACCAATGAAGCATGGAAATGAGTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCAAATGCTTGCCGGATATCGTGAAGTGTCGAGGACGTTTACCTTTTCTACCAAAGGAAAACCAGGGTCTTTTCCAGGGCTTCCTGGGCGTGTGTTTATCTCCCATATTCCTGAATGGACCTCCAATGTTGGGTATTACAATAAAAGTGAGTACCTGAGGGTGGAGCATGCGATTAGTCATGAGGTTCGTGGATCAATTGCGGTTCCCATAACTGATCAGTGCTCTGAACCACCTTGTGCTGTACTAGAAATTGTCACTACAAAGGAAAAGCCTGATTTTGACAAAGAACTAGAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTTTGCCTCCGCGACTTCTTTCCCAGTGTCTATCAAGTAACAAAAGAGCAGCTTTAACAGAGATAATCGATGTGTTACGAGCTGTGTGTCATGCGCATAGGTTGCCACTGGCATTGACATGGATCCCCTGTTGTTATAGTGAGGGAATCGAAGATGAAACTTCAAGAATACGGATTAAAGATGGGCATAAAATTTCTGGTGAGAAATCTGTGCTATGCATTGAAGAATCAGCTTGCTATGTAAACGATAGAGAGGTGGGAGGATTTGTTCATGCATGTGTTGAACATCATCTTGAGGAGGGGCAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCATCCATTCTTCTATCCCGACGTGAAGGCATATAATATTAGTGAATATCCGCTTGCTCACCATGCGCGCAAATATAAGTTGAATGCCGCCGTTGCAATCAGGCTAAGGAGTACATACACAAATGATGATGATTACATATTAGAATTCTTTCTGCCTGTCAATATGAGTGGAAGTCAAGAACAGCAACTTTTATTAGACAATCTATCAGGTACTATGCAGAAAATTTGTCAGAGTTTGAGGACAGTTTCAGATGCCGAATTATCTGGAATAGAAGGCTCGCAAGTGCAGTTTCAAAAGGAAAAAGTATTGAATTATCAAAGTTTTTTCTCCCATATGGCAGTGGATAGTGACCATGATCCAGTCCAGCCTATGACCTTGAGAAACAAGGGAACTGAAGCTGCTCATAACCAGGCAATGAATGGATCAAGAAAGCAGATTGAGAAAAAGAGAAGTACAATGGAGAAGAATGTTAGCTTGAGTGTTCTCCAGCAATACTTCTCCGGTAGTCTTAAGGATGCGGCTAAAAGCATTGGTGGTGAGACTACTACAGCTTTATCTGTGCTGTGA 1476 0.4228 MNNLNPKHKVNGSLQELSAADMGNCLVPRPSAWSLDEKMLRALSFFKESAGGGILAQVWVPMKHGNEFILSTSEQPYLLDQMLAGYREVSRTFTFSTKGKPGSFPGLPGRVFISHIPEWTSNVGYYNKSEYLRVEHAISHEVRGSIAVPITDQCSEPPCAVLEIVTTKEKPDFDKELEIVSSALQLVNLRTTLPPRLLSQCLSSNKRAALTEIIDVLRAVCHAHRLPLALTWIPCCYSEGIEDETSRIRIKDGHKISGEKSVLCIEESACYVNDREVGGFVHACVEHHLEEGQGIAGKALQSNHPFFYPDVKAYNISEYPLAHHARKYKLNAAVAIRLRSTYTNDDDYILEFFLPVNMSGSQEQQLLLDNLSGTMQKICQSLRTVSDAELSGIEGSQVQFQKEKVLNYQSFFSHMAVDSDHDPVQPMTLRNKGTEAAHNQAMNGSRKQIEKKRSTMEKNVSLSVLQQYFSGSLKDAAKSIGGETTTALSVL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc55g00006 491 PANTHER PROTEIN NLP8 24 486 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc55g00006 Stsc-Chr55 22333 26063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc55g00006 27 486 NLP Transcription Factor Family AT3G59580 56.751 1.68e-179 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc55g00006 - - ahf:112736799 787.334