Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc559g00007 ATGGCAAATCTCAATCTTGCTGTGTGTAGTATGATGATCACCACCTTAGCATTCACGCTTTTCACTACTTGTGATGCTAATAACAATAAGGATGATAATCCAAAACTTCATATTGTTTATATGGGCTCATTACCCGAAACAACAAATTCTTACTCTCCAACTTCTCACCATCTCAACTTGCTGCAACGAGTTCTTGATGGTAGCAGCAACCCAGCAAATTCCTTAGTCCGTAGCTACAAAAGGAGTTTCAATGGTTTTGCTGCTATGCTCACGAATGAGCAAGTCGCAAAGTTAGCAGAAATGGAAGATGTTGTGTCAGTTTTTCCAAGCATGACATTCCAAACCCAAACAACAAGATCATGGGATTTCTTAGGATTTCCCAAGGCAGTAAAAAGGCAACCCAAAAGCATAGAAAGCAACCTCGTTGTGGGAGTCCTCGACAGCGGAATTTGGCCTGAATCAGAAAGCTTCAATGACAAAGTCACCGGCCCTGTTCCAGAGAAGTGGAAGGGTACTTGTGCAGGTGGCAAGAACTTCACATGCAACAAGAAGCTAATCGGAGCAAGATTCTACGTAGATGACTCTGCACGAGACGGTCAAGGCCATGGAAGCCATACAGCATCAATAGCAGCAGGAAACTATGTTGATAATGTTGGCTTCTTTGGCATTGCACAAGGCACTGCAAGAGGAGCAGTTCCTTCTGCAAGAATTGCTGCTTATAGAATCTGCAATGCTCAAGGCTGTGCTGGTGCTGGCATCTTAGCTGCATTTGATGATGCAATTGATGATGGAGTTGACATCATTTCCATTTCAGTTGGTACTTCATTCGCACTGCCTCTGGCCGAAGATCCTATTGCCATTGGTGCCTTTCATGCTATGGCCAAAGGGATACTTGTATCCCAATCAGCTGGTAATAATGGCCCTATAACTGCCTCTGTATCAAGCATAGCGCCATGGTTGATAACTGTAGCAGCAAACACTATAGATCGTCAGATCATTGACAAGGTGGTTCTTGGCAATGGAAATGTATTGACCGGGAGTTCGATTAATACTTTCAAGTCAAACGGAATGAATATTCCTATTGCATTGATTAACGGCAATTCAACTAACTGTATGGATGAATTTGCTGATCAATGTAAATGCTTGGATAAAAAACTGGTGGAAGGAAAGATAGTTTTATGTGACACTTATAACACTGGAGTACCCAAAGATTCTGGTGCAGCTGGTGCAGTTGTAAATGAAGATACTGGTAATGTGGGTTATGTCACATTAATGCCTTTTGTCGCATTGCCGCCAAAGGATTATGAATTGATTAAATCCTACAGAAACTCAACAAAAGATCCAAGAGCTGAGATACTCAAGAGTGAGAGTGCTAGAGATCGTAATGCTCCTAAGGTGGCAACATTTTCTGGTCGTGGACCAAACAGCTACATTTCAGAGATCTTGAAACCTGATGTAAGTGCCCCTGGAGTTGACATATTGGCTGCTTATTCACCAATTTCTACACCAACAGAAGATCTTGTTAATGATAACAGATCAGTGAGTTACAGCATTTTGAGTGGAACTTCAATGTCTTGTCCTCATGTTTCTGGAATAGCCACATATGTGAAAAGCTTTCACCCTGATTGGTCACCTGCTGCAATTAAATCTGCTATTCTTACATCAGCAACACCCATGGTTAGAAGCTCTGTGCATGATGTTGGAGAATATGCATATGGATCTGGACAAGCCAATCCAGTTCAAGCACTCAACCCTGGACTAGTTTATGATATTAACAAGGGAGATTATGTGCAAATGCTCTGCAACTCAGGGTATGATAATGCCACAGTTAAGTTGATATCTGGAGAGGTTAATCCATGTAAAGGAGCTGCTGATAGATCATTGGTAAGAAACTTAAATTATCCAACTTTTGCAGCTCGGGTTCTACCCAATGTGACTTTTAACATTAGTTTTGGTAGAACAGTTACAAATGTTGGGTTGGCCAATTCAACTTACAAGGTAACAATAACACCGAATCCAGAAGTTAAGATCACAGTGACACCAACGATTTTGTCATTCAAAGCATTAAACGAGAACAAATGGTTTGTAGTGAATGTGAGTGGTAAGGTACCAAGAAAAAGTGTGGTTATCTCATCAATAGTATGGTCAGATGGAACCCATAATGTTAGAAGCCCAATTGTTATAGATGTTTCATCAGGTGATCAGGAATGA 2211 0.412 MANLNLAVCSMMITTLAFTLFTTCDANNNKDDNPKLHIVYMGSLPETTNSYSPTSHHLNLLQRVLDGSSNPANSLVRSYKRSFNGFAAMLTNEQVAKLAEMEDVVSVFPSMTFQTQTTRSWDFLGFPKAVKRQPKSIESNLVVGVLDSGIWPESESFNDKVTGPVPEKWKGTCAGGKNFTCNKKLIGARFYVDDSARDGQGHGSHTASIAAGNYVDNVGFFGIAQGTARGAVPSARIAAYRICNAQGCAGAGILAAFDDAIDDGVDIISISVGTSFALPLAEDPIAIGAFHAMAKGILVSQSAGNNGPITASVSSIAPWLITVAANTIDRQIIDKVVLGNGNVLTGSSINTFKSNGMNIPIALINGNSTNCMDEFADQCKCLDKKLVEGKIVLCDTYNTGVPKDSGAAGAVVNEDTGNVGYVTLMPFVALPPKDYELIKSYRNSTKDPRAEILKSESARDRNAPKVATFSGRGPNSYISEILKPDVSAPGVDILAAYSPISTPTEDLVNDNRSVSYSILSGTSMSCPHVSGIATYVKSFHPDWSPAAIKSAILTSATPMVRSSVHDVGEYAYGSGQANPVQALNPGLVYDINKGDYVQMLCNSGYDNATVKLISGEVNPCKGAADRSLVRNLNYPTFAARVLPNVTFNISFGRTVTNVGLANSTYKVTITPNPEVKITVTPTILSFKALNENKWFVVNVSGKVPRKSVVISSIVWSDGTHNVRSPIVIDVSSGDQE 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc559g00007 736 Pfam Fibronectin type-III domain 631 728 IPR041469 -
Stsc559g00007 736 Gene3D - 600 731 - -
Stsc559g00007 736 ProSiteProfiles Serine proteases, subtilase domain profile. 120 583 - -
Stsc559g00007 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Stsc559g00007 736 CDD PA_subtilisin_like 336 452 - -
Stsc559g00007 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 727 IPR045051 -
Stsc559g00007 736 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Stsc559g00007 736 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc559g00007 736 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Stsc559g00007 736 SUPERFAMILY Subtilisin-like 123 587 IPR036852 GO:0004252|GO:0006508
Stsc559g00007 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Stsc559g00007 736 Gene3D - 329 459 - -
Stsc559g00007 736 Pfam Subtilase family 139 559 IPR000209 GO:0006508|GO:0008236
Stsc559g00007 736 Pfam Peptidase inhibitor I9 37 115 IPR010259 -
Stsc559g00007 736 Gene3D Peptidase S8/S53 domain 141 596 IPR036852 GO:0004252|GO:0006508
Stsc559g00007 736 FunFam Subtilisin-like protease SBT5.3 25 116 - -
Stsc559g00007 736 CDD Peptidases_S8_3 113 557 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc559g00007 Stsc-Chr559 27881 30091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc559g00007 29 728 Subtilisin-like Serine Gene Family AT5G59100 51.671 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc559g00007 - - psat:127076787 792.727