Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc557g00007 ATGGATTCAAGAAAACTTCTATCCCTTTTGAAAGCCTGTGTGAATTCCAAGTCACTTAAGCAAGGGAAACTCATTCATCAAAAGAGAGAGATTTCACCTGCACAACTATCAGAGCATGCAAGTTCATCCAAGAAGCTGTATCCATCAATAATTGAAGAGCTGTGCCCTCAGTTTTCTCTTGAAGATCTTAGGAAATCAACCAACAACTTTGATGCAAATCATTTAACTGAAATATCAGCATATAATAGAGTATACAAATGTTGTATCAGACATAATGGTGCAAGTGATTTCACAGTAGCATTGAAGAGGTTGAACTATGAAACCGACCTGTGGAAGTTCAAGAAGGAAATCGAGTTCCACTGCCAGCTTCACCATCCAAATTTAGTCTCCCTTATAGGATTCTGCAACCACAAAGATGAGAAGATTCTTGTGTATGAGCACATGTCCAATGGTTCTCTCTATGATTACATATGTTCCATGAATATAGAGCAATTGTCATGGAAGAAAATTTTAGAGATATACATTGGAGCAGCAAAAGGACTGCACTATCTTCACACAGGAACCAAGCGCCCCATCTTTCACTGTGACATGAAGCCCCATAACATTCTTTTGGACAAGAACATGGTACCTAAGCTCTCACACCTTGGATTTTCCTTGCAGGGGCCACCTTTGAATTCAAAGCCAAAACCAATAAAAGTTGACATGGTTATGGGTTCAGCTGGTTACATTGCACCTGAGCATGTCCAAACCAAAATCTTCACAGAAAAATGTGATGTTTACTCATTTGGTATGGTCCTAATAGAAGTTGTATCCACTACCTGCAAGCACACCATCTTTGACAAAATCAGTATGTTGGAGAGGTCATCAGATTTGTCTCTAGATCCATTTGATTTACTGAATCCATCTGTGGAGATATCTGAAATGTTGGAGAGGTTCTCAGTTGATGATATTATTGATCCAATTCTGATGAGGAAGATGGCACCAGAAAGTTTGGCAGTATTCATAGACGTCACAAAAAGATGCTTAAGCAGAGAAGCCAATGAAAGACCAAATATAGGTGAAGTAGAGGTTGAACTTGAGCTAGCACTAGCACTGCAAGAAGAGGCCGATGACCGGAATCATGCTGGTAGCTGGAGATTATAA 1143 0.3963 MDSRKLLSLLKACVNSKSLKQGKLIHQKREISPAQLSEHASSSKKLYPSIIEELCPQFSLEDLRKSTNNFDANHLTEISAYNRVYKCCIRHNGASDFTVALKRLNYETDLWKFKKEIEFHCQLHHPNLVSLIGFCNHKDEKILVYEHMSNGSLYDYICSMNIEQLSWKKILEIYIGAAKGLHYLHTGTKRPIFHCDMKPHNILLDKNMVPKLSHLGFSLQGPPLNSKPKPIKVDMVMGSAGYIAPEHVQTKIFTEKCDVYSFGMVLIEVVSTTCKHTIFDKISMLERSSDLSLDPFDLLNPSVEISEMLERFSVDDIIDPILMRKMAPESLAVFIDVTKRCLSREANERPNIGEVEVELELALALQEEADDRNHAGSWRL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc557g00007 380 Gene3D Phosphorylase Kinase; domain 1 31 147 - -
Stsc557g00007 380 Gene3D Transferase(Phosphotransferase) domain 1 148 377 - -
Stsc557g00007 380 SMART serkin_6 70 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc557g00007 380 ProSiteProfiles Protein kinase domain profile. 70 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc557g00007 380 PANTHER OS07G0166700 PROTEIN 55 366 IPR045272 GO:0004714|GO:0006468
Stsc557g00007 380 FunFam Receptor-like protein kinase ANXUR2 36 147 - -
Stsc557g00007 380 SUPERFAMILY Protein kinase-like (PK-like) 44 359 IPR011009 -
Stsc557g00007 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Stsc557g00007 380 Pfam Protein kinase domain 81 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc557g00007 Stsc-Chr557 23725 28558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc557g00007 49 371 Receptor kinase-like Gene Family AT5G59700 37.846 2.38e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc557g00007 Pkinase 3.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc557g00007 - - ahf:112797906 453.751