Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc557g00002 ATGGGCTTCTTTTGTTTGTGGTGTAATCCAAGGCCAAGGGGAACAAAACAAGCATCTACCACCATACTAGAACTTGAACTTTGTCACCAATTTTCATTTGCGGAGATACAATCAGCCACATGCAACTTCAACAAGTCTTTCATAATTGGACATGGTGCTTTTGGCAGTACTGTTTACAAAGGTTTTCTGGAAAAAAGCTGTGATCAAGTTGCCATCAAACGCTGCAGCAAGAAATCTATTTATGGTCTGTCTGAGATAAGGAATGAGGTTGTCTTGCTTTGTCAGCTGCAACATCCTAATCTCATGCCTTTCCTTGGATTTTGCGCCGAGAGAAATGAGTTGGTTCTTGTCTATAAACTCATGCCTAACGGTTCCCTTCATGATCATCTTCATGGTGGTATTGGAAGCTTTAAAAGTCCACTTTCATGGAATAGGAGGCTTCAAATTTGCATTGGGGTGGCACGTGCACTGCACTATCTTCACACTGGAGCCAAGTATGTTATCATTCACCGCGATGTTAACACAAGATACATTCTTTTGGATAACAATTTGGATGCTAAAGTTTCTGGTTTGTTCTTGTCCAAAAGGGGACCTCTTAGCATCTCAAAGTCATTGATTAAAGTGGTGTCACCGGTGATGGGAACTTATGGATATACTGATCCAGAATATGCGGCAACTGGTGTTTTGTCTGAAAAATCTGATGTATATTCATTTGGTGTAGTTCTGTTAGAAGTTCTTAGTGCAAAGCAGGCACAAGATATTTACAAGGAACACTTGGAAAAGGAAAACTGCAATCAATCACTCAAGTCATATGCAGAGGAAATTGTTGACCCGTTTCTTAAGTCAAAGATTGCTCCAGATTGTTGGAAAACATTTATTGACATCACTGAGAGATGTTTGCTCAAAGAGGGAAGGGAGAGGCCAGACATGGGGGAAGTGGAGCTCCATCTTGAACATGCACTAAAATCTCAAGAGGAAGCTGATGCCAAGATTTGA 996 0.4086 MGFFCLWCNPRPRGTKQASTTILELELCHQFSFAEIQSATCNFNKSFIIGHGAFGSTVYKGFLEKSCDQVAIKRCSKKSIYGLSEIRNEVVLLCQLQHPNLMPFLGFCAERNELVLVYKLMPNGSLHDHLHGGIGSFKSPLSWNRRLQICIGVARALHYLHTGAKYVIIHRDVNTRYILLDNNLDAKVSGLFLSKRGPLSISKSLIKVVSPVMGTYGYTDPEYAATGVLSEKSDVYSFGVVLLEVLSAKQAQDIYKEHLEKENCNQSLKSYAEEIVDPFLKSKIAPDCWKTFIDITERCLLKEGRERPDMGEVELHLEHALKSQEEADAKI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc557g00002 331 PIRSF ILK 13 329 - -
Stsc557g00002 331 FunFam receptor-like protein kinase FERONIA 10 120 - -
Stsc557g00002 331 ProSiteProfiles Protein kinase domain profile. 43 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc557g00002 331 Pfam Protein tyrosine and serine/threonine kinase 48 314 IPR001245 GO:0004672|GO:0006468
Stsc557g00002 331 SUPERFAMILY Protein kinase-like (PK-like) 20 318 IPR011009 -
Stsc557g00002 331 Gene3D Transferase(Phosphotransferase) domain 1 121 330 - -
Stsc557g00002 331 PANTHER OS07G0166700 PROTEIN 28 324 IPR045272 GO:0004714|GO:0006468
Stsc557g00002 331 Gene3D Phosphorylase Kinase; domain 1 28 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc557g00002 Stsc-Chr557 9137 10132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc557g00002 7 330 Receptor kinase-like Gene Family AT5G39000 45.619 2.29e-81 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc557g00002 PK_Tyr_Ser-Thr 4.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc557g00002 - - adu:107486248 499.975