Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc54g00012 ATGCTTCCATTAGTCTTGTACAAACGTGTAGAATCCTTGAAATACAGTTCAGCAGTGTCAACTTTTCTAGCAGTGGTGTTTGTGGCCATATGTTCTGGGATGGCAATTCTTGCAGTCTTGCAAGGAAAATCACAAACCCCAAGATGGTTTCCTCGCTTAGATTACCAAACATCCTTCTTTGATCTCTTCACTGCAGTTCCAGTTGTAGTTACAGCCTTCACATTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGGCATCCGACATGGCCAAAGCGGTTCGAATAGCCTTGATGCTCTGTGCTGTCATATACTTCGCGATAGGCCTATGCGGGTACCTCTTGTTCGGAGATTCAACGCAATCGGACATTCTGATCAATTTCGATCAAAATGCTGGTTCTGCGGTTGGTTCCTTGCTCAATGGTGTTGTCCGTGTAAGCTATGCTTTACACATTATGCTGGTTTTTCCTCTGTTGAACTTCTCACTGAGAGCCAACATAGATGAACTCCTCTTCCCCAAGAAGCCTACACTTTCCAATGACAACAAAAGATTTGTGATCCTCACTCTGGTGCTTCTAGTCTTCAGCTACCTTGCTGCCATAGCTATTCCAGATATTTGGTACTTCTTTCAGTTTCTGGGATCAACAACTGCTTTGTGCCTTGCCTTTGTTTTCCCAGGAGCTATTGTTTTAAGGGATGCTTATGAGGTATCAACAAAAAGGGACAAAATCATAGCACTAGTTATGATTATACTAGCTGTGGTGACTAGTGTGATAGCCATTTCCACCAATGTATATAATGCTTTTAGTACCAAGTCATGA 828 0.4251 MLPLVLYKRVESLKYSSAVSTFLAVVFVAICSGMAILAVLQGKSQTPRWFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASDMAKAVRIALMLCAVIYFAIGLCGYLLFGDSTQSDILINFDQNAGSAVGSLLNGVVRVSYALHIMLVFPLLNFSLRANIDELLFPKKPTLSNDNKRFVILTLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFVFPGAIVLRDAYEVSTKRDKIIALVMIILAVVTSVIAISTNVYNAFSTKS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc54g00012 275 PANTHER AMINO ACID TRANSPORTER 1 258 - -
Stsc54g00012 275 Pfam Transmembrane amino acid transporter protein 2 263 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc54g00012 Stsc-Chr54 61680 64352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc54g00012 1 269 Amino Acid or Auxin Permease AAAP Family AT3G56200 63.941 6.36e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc54g00012 - - gmx:100815694 452.595