Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc54g00007 ATGCTTGAGTGTGATGAATGCAAAGCTGCACCTAATGATCAAACCATAACCATACCAGACCTAAACCATGAAGAACTTTCATCTCTACTAGAGTTTCTCTACAGTGGCACATTGCCTGAACAAACAATCGGGAAGGATGTCTATGCCTTATCGCGCGCGGCCGATAAATACGCGATCCCACACTTGTTAAGGCATTGCGAGAGGTACTTGTTGAGCTCACTCAACACTTCAAATGCACTCGAGACGCTCGAGATCGCCGACACGTGTTCGAATTACAACTTGAAGGAGACAACGTTGGAATTCTTAGTTAAGAACATTGAGCATGTTGTGACATCTTCTAGGTTTGAAGCTTTTGTGCATAGGAATCCACACTTGACTGTGCAATTGGTTTCTAGGGCTTTTGCAAATGGTTCCAAGTAG 420 0.4405 MLECDECKAAPNDQTITIPDLNHEELSSLLEFLYSGTLPEQTIGKDVYALSRAADKYAIPHLLRHCERYLLSSLNTSNALETLEIADTCSNYNLKETTLEFLVKNIEHVVTSSRFEAFVHRNPHLTVQLVSRAFANGSK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc54g00007 139 SUPERFAMILY POZ domain 12 72 IPR011333 -
Stsc54g00007 139 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 136 IPR044784 -
Stsc54g00007 139 Gene3D - 76 139 - -
Stsc54g00007 139 Pfam BTB/POZ domain 12 73 IPR000210 GO:0005515
Stsc54g00007 139 Gene3D Potassium Channel Kv1.1; Chain A 1 75 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc54g00007 Stsc-Chr54 27224 27721 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc54g00007 BTB 1.4e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc54g00007 K10523 - gmx:100814664 224.172