Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc54g00007 | ATGCTTGAGTGTGATGAATGCAAAGCTGCACCTAATGATCAAACCATAACCATACCAGACCTAAACCATGAAGAACTTTCATCTCTACTAGAGTTTCTCTACAGTGGCACATTGCCTGAACAAACAATCGGGAAGGATGTCTATGCCTTATCGCGCGCGGCCGATAAATACGCGATCCCACACTTGTTAAGGCATTGCGAGAGGTACTTGTTGAGCTCACTCAACACTTCAAATGCACTCGAGACGCTCGAGATCGCCGACACGTGTTCGAATTACAACTTGAAGGAGACAACGTTGGAATTCTTAGTTAAGAACATTGAGCATGTTGTGACATCTTCTAGGTTTGAAGCTTTTGTGCATAGGAATCCACACTTGACTGTGCAATTGGTTTCTAGGGCTTTTGCAAATGGTTCCAAGTAG | 420 | 0.4405 | MLECDECKAAPNDQTITIPDLNHEELSSLLEFLYSGTLPEQTIGKDVYALSRAADKYAIPHLLRHCERYLLSSLNTSNALETLEIADTCSNYNLKETTLEFLVKNIEHVVTSSRFEAFVHRNPHLTVQLVSRAFANGSK | 139 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc54g00007 | 139 | SUPERFAMILY | POZ domain | 12 | 72 | IPR011333 | - | |
Stsc54g00007 | 139 | PANTHER | BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED | 1 | 136 | IPR044784 | - | |
Stsc54g00007 | 139 | Gene3D | - | 76 | 139 | - | - | |
Stsc54g00007 | 139 | Pfam | BTB/POZ domain | 12 | 73 | IPR000210 | GO:0005515 | |
Stsc54g00007 | 139 | Gene3D | Potassium Channel Kv1.1; Chain A | 1 | 75 | IPR011333 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc54g00007 | Stsc-Chr54 | 27224 | 27721 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Stsc54g00007 | BTB | 1.4e-10 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc54g00007 | K10523 | - | gmx:100814664 | 224.172 |