Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc54g00006 ATGGAGATTTTTAATGAACAAAAAGAGGATTTGGGTTTTCTTAGAGGAATTGTTGCTGCCTTCAAAGAACAAATTCACACTGATATACTTGTTAAACCAGGTAGCCATGGTCTTCCAATACCTGCACATAAGTTTGTATTGGCAACAAGATCAGAAATATTTAAGAACATGCTTGAGTGTGATGAATGCAAAGCTGCACCTAATGATCAAACCATAACCATACCAGACCTAAACCATGAAGAACTTTCATCTCTACTAGAGTTTCTCTACAGTGGCACATTGCCTGAACAAACAATCGGGAAGGATGTCTATGCCTTATCGCGCGCGGCCGATAAATACGCGATCCCACACTTGTTAAGGCATTGCGAGAGGTACTTGTTGAGCTCACTCAACACTTCAAATGCACTCGAGACGCTCGAGATCGCCGACACGTGTTCGAATTACAACTTGAAGGAGACAACGTTGGAATTCTTAGTTAAGAACATTGAGCATGTTGTGACATCTTCTAGGTTTGAAGCTTTTGTGCATAGGAATCCACACTTGACTGTGCAATTGGTTTCTAGGGCTTTTGCAAATGGTTCCAAGTAG 588 0.4133 MEIFNEQKEDLGFLRGIVAAFKEQIHTDILVKPGSHGLPIPAHKFVLATRSEIFKNMLECDECKAAPNDQTITIPDLNHEELSSLLEFLYSGTLPEQTIGKDVYALSRAADKYAIPHLLRHCERYLLSSLNTSNALETLEIADTCSNYNLKETTLEFLVKNIEHVVTSSRFEAFVHRNPHLTVQLVSRAFANGSK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc54g00006 195 SUPERFAMILY POZ domain 14 129 IPR011333 -
Stsc54g00006 195 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 2 192 IPR044784 -
Stsc54g00006 195 Pfam BTB/POZ domain 22 129 IPR000210 GO:0005515
Stsc54g00006 195 ProSiteProfiles BTB domain profile. 27 98 IPR000210 GO:0005515
Stsc54g00006 195 Gene3D Potassium Channel Kv1.1; Chain A 3 130 IPR011333 -
Stsc54g00006 195 Gene3D - 131 195 - -
Stsc54g00006 195 SMART BTB_4 27 130 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc54g00006 Stsc-Chr54 25856 27721 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Stsc54g00006 BTB 7.3e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc54g00006 K10523 - gmx:100777561 307.76