Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc540g00001 ATGGGAGAAGACTGCGGAACTTGGATGCCGCAGCTGCATTTCGATTTGCAGTCACCCAATTTGAATTCTCAGTCACCCAATTTGAATTCTTTTGGTGCTCCCCTTGATGCGGGGAAGCCAAATGGCATATCTGCTGCTGCGAACTCAGGCATCAATGACATAGTCACGAGGAATGAGACAATGCCGGCATATGTGTCCTCTGCACTTCCGCATTTGCAGTTAGGACATTCTAATGCACCGCCTCATGGTTGGTTTTATTGTTTGCCTCGCTTCCGACAGGGCTTTACTTCTAACCCTGTCCCTAACTTAAATACAAAAGAAAAACTCCATTCGGGCTGTGTCAAAACTTTCAGGGACGAAACTAAACCTGATGGTGAGTCCGGACTCCGTCAGAAGCAGTTCCTGGTCATTGACCAATCGGGTGATAAAACAACCCTGATTTATAGCTCACAGCTTGGGAGTCCTGTTGAGCGCCTTGCTTCTTGGGATTCAAAACTGCATGGTTCCAATAACTTGAACAATGTGAATGAGCCTTCTTTGAGAAGAGATTTGAACCATGTGGTTCTACCAACTCTAGATGATAAAGTTGATGATGAAAATCTAGGAACTGATGCTGAAAGTGAGATGCATGAAGACACAGAAGAAATCAATGCACTACTTTACTCCGACAGCGAGGGTTACTCCACTGAGGATGATGAAGTTACTAGCACTGGCCATTCACCGAGTACAATGACCAGTCATCATAACCAGGAACCAATTAGGGATACTGCTGAAGAGGTTGCTAGTTCGGCTGGGAAAACAAAGAAGCGGAAGTTGTTTGACAAAGCTCACGATGACGAGGAGCTTGTGATGGATACTGCAAGTTCTCTGAATCTGAACATACCCTTTAATACGGGAGACGACACAGAATCAAGATTCTCCTGTGGCAGCAACAGTCAGGGGTTAAACAACGAAATAGGGTCCTTGTTAGGCAACAAGAAGATGAGGAAGGAGAAGATACAAGATGTACTGAGCATTCTGCAGTGCATAATTCCCAGTGGGAAGGATAAGGAACTTGTTGAGCTTCTCGAGGAAGCAATAGGATCGCTGAAATCCTTGAAGATGAAGGCTAAAGCTCTGGGGCTTGATGCCTTCTAA 1137 0.4529 MGEDCGTWMPQLHFDLQSPNLNSQSPNLNSFGAPLDAGKPNGISAAANSGINDIVTRNETMPAYVSSALPHLQLGHSNAPPHGWFYCLPRFRQGFTSNPVPNLNTKEKLHSGCVKTFRDETKPDGESGLRQKQFLVIDQSGDKTTLIYSSQLGSPVERLASWDSKLHGSNNLNNVNEPSLRRDLNHVVLPTLDDKVDDENLGTDAESEMHEDTEEINALLYSDSEGYSTEDDEVTSTGHSPSTMTSHHNQEPIRDTAEEVASSAGKTKKRKLFDKAHDDEELVMDTASSLNLNIPFNTGDDTESRFSCGSNSQGLNNEIGSLLGNKKMRKEKIQDVLSILQCIIPSGKDKELVELLEEAIGSLKSLKMKAKALGLDAF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc540g00001 378 PANTHER TRANSCRIPTION FACTOR BHLH145 19 376 IPR037546 -
Stsc540g00001 378 MobiDBLite consensus disorder prediction 227 269 - -
Stsc540g00001 378 MobiDBLite consensus disorder prediction 251 269 - -
Stsc540g00001 378 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc540g00001 Stsc-Chr540 5599 6735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc540g00001 50 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 29.762 1.47e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc540g00001 - - aprc:113846036 475.707