Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc538g00005 ATGTTGTTTTTGTCTGATGAAAATGGTGGTGCAAGAAACAAAGGTTTTGCACTCCAAGTGTTCACAGGAAGGTGGTTCATGGTTTTCTCATCATTCATGATCATGTCAGTCTCAGGAGCAAGCTACATGTTCAGCCTCTACTCCAGAGAAATCAAATCCTCATTGGGATATGACCAATCTACCCTCAATCTCCTAAGCTTCTTCAAGGACTTAGGCTCCAACATAGGCATTCTCTCTGGCCTAATCAATGAAGTCACACCCCCTTATGTTGTCTTAACAATTGGTGGCATCCTCAATTTCTTTGGATACTTTATTGTCTGGCTTGCTGTCACAAAAAAGATTCCAAAGCCACAAGTTTGGACCATGTGTTTGTACATTTTCATTGGTGCAAATTCACATTGTTCAACAAACACAGGTGCACTTGTCACAAGTGTTAAGAATTTTCCTGGTCTTAGAGGCATTGTTATAGGCCTTCTAAGTGGCTACCTTGGTTTGAGTGCTGCAATCATCACTCAATTGTACTATGCTTTCTATGGAGATGACACAAAATCTCTTCTTTTACTCATGGCATGGCTACCAACTGCTACAGCTTTTGTTTTTCTACCATTCATTAGGCACCATAAGGGTGTTCAAGAAAAGAATGATTCCAAGGCTTTCTATAAGTTCCTTTACATGTCACTAGTCCTTGCAGTGTTCCTCATGATTGTAATCATAGTTGAAAAATGTTTATCATTCACTCAGACTGAATATTCTGTTACCACCACTTTGATGCTTCTCTTGCTTGTTTTTCTTCCACTTGGTGTTGTTGTTCAGGAAGAACACAGAATTTGGAAGGCCAAAAAACAACACATGAATAATCCTTTGAGTATTGTAACTGCAGAGAAGCCTAAAGAAGTGATGATGAAGTCTGCAGAACCATCATCATCATCAGATTCTTGTTGGAAAGACATGTTCAGGGCACCAAGGAGAGGTGAAGATCATACAATACTTCAGGCAATTTTCAATCTTGACATGGTGATTTTGTTCTTAGCTACAATATGTGGTCTAGGTGGTAATCTCACAGTGGTGAATAACTTGAGTCAAATTGGAACAGCATTAGGATATTCCCCACACAGCATAACAACATTTGTGTCCCTCATGGCAATTTGGATCTACCTAGGTAAAATTGTCCAAGGTGTGATCTCAGAGTTCATCATAAAAAGATTCAAGATCCCTAGGCCATTGATGTTCACATCAATACTTTTGCTGTCATGTGTTGGTCACCTCTTAATTGCATTTAATGTCCCAAATGGTCTCTATGTAGCATCCATTGTAATTGGGTTCTGCTTTGGGGCAAATTGGCCAATACTTTTCTCAATAATTTCTGAGCTTTTTGGACTTAAATATTACTCAACATTGTATAATGTTGGGTCAATAGCAAGTCCAATTGGGTCATATTTGCTTAGTGTGAGGGTTGCTGGGCACTTTTATGATAAAGAAGGTTTAAGGCAAATGGCAGCAATGGGGCTAAAGAGAAATCCAAATGAAGAGTTGAATTGCAATGGTGGTGAATGTTACAAGCTAGCATTCATTATAATCACTGCTGTGTGTTTATTTGGAGCACTTGTGTCACTGGTTTTGGTGTATAGGACTAGAGAGTTATACAAAGGTGACTTGTACAAGAAGTTTAGAGGAGAAGAAGAATCTACTATCAATACTGTTGTTGAAACTGAAATGGCTATGCCTCAAAACAAGATTATTGGAGAACCTGCTGCAAATTGA 1761 0.3878 MLFLSDENGGARNKGFALQVFTGRWFMVFSSFMIMSVSGASYMFSLYSREIKSSLGYDQSTLNLLSFFKDLGSNIGILSGLINEVTPPYVVLTIGGILNFFGYFIVWLAVTKKIPKPQVWTMCLYIFIGANSHCSTNTGALVTSVKNFPGLRGIVIGLLSGYLGLSAAIITQLYYAFYGDDTKSLLLLMAWLPTATAFVFLPFIRHHKGVQEKNDSKAFYKFLYMSLVLAVFLMIVIIVEKCLSFTQTEYSVTTTLMLLLLVFLPLGVVVQEEHRIWKAKKQHMNNPLSIVTAEKPKEVMMKSAEPSSSSDSCWKDMFRAPRRGEDHTILQAIFNLDMVILFLATICGLGGNLTVVNNLSQIGTALGYSPHSITTFVSLMAIWIYLGKIVQGVISEFIIKRFKIPRPLMFTSILLLSCVGHLLIAFNVPNGLYVASIVIGFCFGANWPILFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGHFYDKEGLRQMAAMGLKRNPNEELNCNGGECYKLAFIIITAVCLFGALVSLVLVYRTRELYKGDLYKKFRGEEESTINTVVETEMAMPQNKIIGEPAAN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc538g00005 586 CDD MFS_Mch1p_like 23 534 - -
Stsc538g00005 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 551 - -
Stsc538g00005 586 Pfam Major Facilitator Superfamily 342 545 IPR011701 GO:0022857|GO:0055085
Stsc538g00005 586 SUPERFAMILY MFS general substrate transporter 25 549 IPR036259 -
Stsc538g00005 586 Pfam Nodulin-like 24 269 IPR010658 -
Stsc538g00005 586 Gene3D MFS general substrate transporter like domains 333 549 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc538g00005 Stsc-Chr538 34002 35762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc538g00005 10 557 Nodulin-like Gene Family AT2G39210 59.571 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc538g00005 - - gmx:100789645 829.32