Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc537g00002 ATGGAGAATAACAATAACAACAACATTATTATGCATTCTCATCATTGTGTAGAAATGGAAGTGCACCATGTTGTGCCCCCACCACACAAGAGCACCTTCCAGAAGCTCAAGGCTAGGCTCAAGGAAACTTTCTTCCCTGATGATCCTTTGCGCCAATTCAAGGGACAACCATTGAAGACCAAGTTTGTTCTTGGAGCTCAATATTTCTTCCCTATTCTTCAATGGGGTCCTAATTATACCTTCCAACTCTTCAAATCTGACCTTATTGCTGGCCTCACCATTGCTAGCTTGGCCATTCCTCAGGGAATCAGTTATGCAAAGCTTGCAAACCTTCCTCCAATTGTGGGACTATATTCTAGCTTTGTTCCTCCACTAGTTTATGCTGTCCTTGGAAGCTCAAGGGACCTAGCTGTAGGACCAGTTTCTATTGCATCTCTTGTGCTTGGATCCATGTTGAGGCAAGAAGTGTCTCCAACAACAGACCCTCTTCTCTTTCTTCAGCTTGCTTTTACTTCTACCTTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGGATTCTAAGGCTTGGGTTTATCATTGACTTTCTATCAAAGGCCATACTTATTGGATTCATGGCAGGAGCAGCTATAATTGTATCACTGCAACAACTTAAGAGCCTCCTTGGAATCACACATTTCACTAAACAAATGGGCCTTGTTCCTTGGTCATGGCAAACAATACTAATGGGAATTTGCTTCTTGATTCTACTACTACTGGCAAGACACATTAGTATAAGAAAACCAAAGCTTTTCTGGGTCTCAGCTGGTGCTCCTCTTGTATCAGTAATCATCTCAACTATCTTGGTTTTTGCAATAAAAGGCCAAAACCATGGCATCAGTGTAATTGGAAAATTGCAAGAAGGAATAAACCCTCCTTCTTGGAACATGTTGAGGTTTCATGGAAGTCATTTAGGCCTTGTCATAAAAACTGGGATCATCACAGGCATTTTATCCCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCAGCTCTCAGAAACTACAAAGTGGATGGTAATAAAGAAATGATGGCCATTGGATGCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCCTTCTCTCGCTCGGCGGTTAATAACAATGCTGGGGCGAAATCAGCCGTGTCCAATGTAGTGATGTCTGTGACAGTCATGGTGACCCTCCTCTTCCTTATGCCGTTGTTCCAATACACACCTAATGTTGTGTTGGGTGCAATCATAGTCACCGCGGTGATTGGTCTCATCGATATCCCTGCTGCGCTCCTCATTTGGAGGATCGACAAGTTCGATTTCATTGTTATGTTGACTGCATTCTTTGGTGTTATTTTCATCTCTGTCCAGCAAGGACTTGCTCTCGCAGTTGGGTTATCAACATTTAAGATATTACTGCAAATTACAAGGCCTAAAACAGTAATGTTGGGAAAGATACCAGGGACAGACATATACAGAAATCTTCATCAGTATAAGGAAGCTGTGAGAGTACCTGGTTTTCTCATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATAACATACCTCAATGAAAGGACGTTACGATGGATTGAAGATGAAGAAGACAACAAAAAGGAACACTCAAGCCTTCAATTTGTGATCCTGGAAATGTCAGCTGTGAGCGCCATCGACACAAGTGGAATTTCACTTTTCAGGGATTTGAAAGCAACACTGGAAAAGAAGGGGATTGAGCTTGTGCTGGTGAATCCACTCGCCGAGGTCATAGAAAAGCTGAAAAGAGTAGATGAAGCCAATGATTTCATACCAACACAAAACCTGTTCTTGACGGTTGGAGAGGCTGTAGCTTCACTTTCAATAGCAATGAAAAACCAATCAACCATCCCAGAAGGAGCACACACAATTGTGCCACATTACTGA 1944 0.4239 MENNNNNNIIMHSHHCVEMEVHHVVPPPHKSTFQKLKARLKETFFPDDPLRQFKGQPLKTKFVLGAQYFFPILQWGPNYTFQLFKSDLIAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTTDPLLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKQMGLVPWSWQTILMGICFLILLLLARHISIRKPKLFWVSAGAPLVSVIISTILVFAIKGQNHGISVIGKLQEGINPPSWNMLRFHGSHLGLVIKTGIITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGCMNVVGSFTSCYVTTGAFSRSAVNNNAGAKSAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAALLIWRIDKFDFIVMLTAFFGVIFISVQQGLALAVGLSTFKILLQITRPKTVMLGKIPGTDIYRNLHQYKEAVRVPGFLILSIEAPINFANITYLNERTLRWIEDEEDNKKEHSSLQFVILEMSAVSAIDTSGISLFRDLKATLEKKGIELVLVNPLAEVIEKLKRVDEANDFIPTQNLFLTVGEAVASLSIAMKNQSTIPEGAHTIVPHY 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc537g00002 647 Pfam STAS domain 505 622 IPR002645 -
Stsc537g00002 647 SUPERFAMILY SpoIIaa-like 510 626 IPR036513 -
Stsc537g00002 647 CDD STAS_SulP_like_sulfate_transporter 505 619 - -
Stsc537g00002 647 Gene3D STAS domain 484 628 IPR036513 -
Stsc537g00002 647 NCBIfam sulfate permease 71 621 IPR001902 GO:0016020|GO:0055085
Stsc537g00002 647 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Stsc537g00002 647 FunFam Sulfate transporter 31 484 629 - -
Stsc537g00002 647 ProSiteProfiles STAS domain profile. 504 626 IPR002645 -
Stsc537g00002 647 Pfam Sulfate permease family 84 453 IPR011547 GO:0016020
Stsc537g00002 647 PANTHER SULFATE TRANSPORTER 30 626 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc537g00002 Stsc-Chr537 18365 24973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc537g00002 19 631 Inorganic Solute Cotransporters AT3G15990 65.176 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc537g00002 K17471 - gmx:100819130 1041.57