Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc534g00006 ATGAAAAAAGTTCAAGAAGAACTTAGAATTTTCGGAGGTCAAAAAGATTTCTTAGATGAAGAAGATCTTCAAAAGTGCATCTATTTGAATGCGGTGATAAAAGAAACATTCAGATTATATCCAGTACCATTACTTATGCCAAAAGAAACAAATGAGAAGTCTTGGGAAAATCCACAAAAGTTTTACCCTGAAAGATTCTTGGAAAGTTCAATTGATGTCAAGGGTCAAGATTTTGAGCTAATTCCATTTGGTGCAGGACGTAGAATTTGCCCAGGAATGCATATGGGGCTTGCAGCACTTGAACTTATCCTTGGTAATCTTCTTTATTCATTTGATTGGGAACTTCCAGAAGGAGTGAAAAATGAAGATGTTGATATTGAATCTCTTCCAGGATTGGCTCCATATAAAAAGAATCCTCTTTATCTTATTGCCAGAACTAAGATGGAACTGAATAATGATATCTACATAGTTTAA 474 0.3439 MKKVQEELRIFGGQKDFLDEEDLQKCIYLNAVIKETFRLYPVPLLMPKETNEKSWENPQKFYPERFLESSIDVKGQDFELIPFGAGRRICPGMHMGLAALELILGNLLYSFDWELPEGVKNEDVDIESLPGLAPYKKNPLYLIARTKMELNNDIYIV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc534g00006 157 PRINTS P450 superfamily signature 90 101 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 PRINTS P450 superfamily signature 81 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 Gene3D Cytochrome P450 1 51 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 PRINTS E-class P450 group I signature 80 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 PRINTS E-class P450 group I signature 44 68 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 PRINTS E-class P450 group I signature 90 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 Pfam Cytochrome P450 50 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 Pfam Cytochrome P450 1 51 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 83 92 IPR017972 GO:0005506|GO:0016705
Stsc534g00006 157 PANTHER CYTOCHROME P450 71B11-RELATED 1 53 - -
Stsc534g00006 157 Gene3D Cytochrome P450 52 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00006 157 SUPERFAMILY Cytochrome P450 1 144 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc534g00006 Stsc-Chr534 34571 35122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc534g00006 1 143 Cytochrome P450 AT3G26180 47.368 3.16e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc534g00006 - - gmx:100805576 198.364