Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc534g00002 ATGAGGGCAGCCACATACAACATGGTTTCAACATTTATCCTAATACTATGTCTAACTATTCCTTTGATCCTGTTCTTCTTCTTCTTCCAAAAACAAAAAACACTCAAGAACAAAGCTCTTCTACCAGCTCCAAGAGGCCTCCCAATAATTGGAAATCTTCACCAACTAGATAATTCTTCACTTTCTTCTCAGCTATTTAAACTCTCAAAAACATATGGCCCTATATTCTCTCTTCAATTGGGTTTGAGGTCAGCAATTGTTATTTCATCTCCTAAATTGGCCGAAGAAGCATTGAAAAACCATGATCGTGTATTTGCCGGAAGACCAAACCTAATTGGTCCGCAAAAATTGTCCTATAATGGGATTGCCTTTGGAAGAAGGTATGAAGATGAAGGAGTTGAAAGGAGTAAGTTCCATGATTTGCTGAATGAATGTCAAGCAATGTTGGCTGGCTTCTTTGTTTCGGATTATATTCCTTTCATGGGTTGGATTGATAGACTCAATGGAATGCATGCACGTCTTGATAGGATTTTCAAGGAGTTGGACAAGTTCTATCAAGAAGTGATTGATGAGCACATGGATCCTAATAGAGACACTTCTAATGGAGAGGATATCATTGATGTCCTACTTCAATTGAAGAAGCACAAATCATTATCCTTTGACCTCACTATGGATCACATCAAAGCACTCTTACTGGACATACTTGTAGCAGGAACAGATACAACTGCAGCCACGACAGTTTGGGCTATGACTGCACTAATAAAAAATCCAAGAGTGATGAGAAAAGTTCAAGAAGAACTTAGAAACTTTGGAGGTCAAAAAGATTTCTTAGAAGAAGAAGAAATTAAAAAGTGTATCTATTTTAAGGCTGTGATAAAAGAAACATTAAGACTATATCCGCCAGTACCATTATTTGTACCAAAAGAAACAAATGAAAAGTGCAGTATAAATGGCTACGAAATTCCAAGCAAGACTATTGTGTATGTGAATGCTTGGACTATTCATAGAGATCCTAAAGCTTGGAAAGATCCACATGAATTTTGTCCTGAGAGATTTTTAGACAGGGATATAGATTTTCTTGGACAAGATTTCGAGCTGATTCCATTTGGTGCCGGTAGAAGAATTTGCCCAGGTATGCATATGGCACTTGCTTCTCTTGACCTTATTCTTGCTAATCTTCTTTACTCTTTTGATTGGAAACCTCCGGAAGGGATGACAAAAGAAGATATTGATACTCAAGTGTTGCCTGGAGTAACACAACATAAGAAGAATCCTCTTTATCTTATTGCAAAAAATTACAAGGGTTAG 1308 0.3723 MRAATYNMVSTFILILCLTIPLILFFFFFQKQKTLKNKALLPAPRGLPIIGNLHQLDNSSLSSQLFKLSKTYGPIFSLQLGLRSAIVISSPKLAEEALKNHDRVFAGRPNLIGPQKLSYNGIAFGRRYEDEGVERSKFHDLLNECQAMLAGFFVSDYIPFMGWIDRLNGMHARLDRIFKELDKFYQEVIDEHMDPNRDTSNGEDIIDVLLQLKKHKSLSFDLTMDHIKALLLDILVAGTDTTAATTVWAMTALIKNPRVMRKVQEELRNFGGQKDFLEEEEIKKCIYFKAVIKETLRLYPPVPLFVPKETNEKCSINGYEIPSKTIVYVNAWTIHRDPKAWKDPHEFCPERFLDRDIDFLGQDFELIPFGAGRRICPGMHMALASLDLILANLLYSFDWKPPEGMTKEDIDTQVLPGVTQHKKNPLYLIAKNYKG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc534g00002 435 Coils Coil 260 280 - -
Stsc534g00002 435 SUPERFAMILY Cytochrome P450 42 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 Gene3D Cytochrome P450 121 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 Gene3D Cytochrome P450 31 120 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 FunFam Cytochrome P450 83B1 121 429 - -
Stsc534g00002 435 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 Pfam Cytochrome P450 42 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 Pfam Cytochrome P450 121 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Stsc534g00002 435 PANTHER CYTOCHROME P450 71B11-RELATED 22 121 - -
Stsc534g00002 435 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc534g00002 435 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc534g00002 Stsc-Chr534 11449 13850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc534g00002 123 428 Cytochrome P450 AT4G31500 49.838 6.77e-109 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc534g00002 - - gmx:100801312 486.493