Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc531g00010 ATGGTAATGATGGATCTCAACAAGGAATGGTCGTCTGAGGAATTGAGTGAGAGCAAGAAGTGTTGCAGTGATTGCAAGACCACCAAGACTCCACTGTGGAGAGGAGGACCTGCTGGTCCCAAGACTCTGTGCAACGCGTGCGGAATAAGGTACCGGAAGAGAAGGGCTTCCACGGTGGGAATGAGCAAAGGACAAGAGAGGAAGAGAGAGAGATCGGAGAATGGCGGTGGCAGCAGCAGCTCCTCCTCTGATGTTGACGTTTGTGGAAACGATTTGAAGGAGTCGTTGAAAGTGAATTTGATGGCGTTAGGTGAGGAGTTTTGGTTGCACCGCTCAGCAGCTACGTCGGTTCTAAAGAAGAAACAGAGGAATATGTGTTTGTTGGGGGAAGAGGAACAAGCTGCTGTGTGTTTAATGGCACTCTCTTGTGGCTATGTTTTTGCTTGA 447 0.4922 MVMMDLNKEWSSEELSESKKCCSDCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASTVGMSKGQERKRERSENGGGSSSSSSDVDVCGNDLKESLKVNLMALGEEFWLHRSAATSVLKKKQRNMCLLGEEEQAAVCLMALSCGYVFA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc531g00010 148 MobiDBLite consensus disorder prediction 59 74 - -
Stsc531g00010 148 ProSiteProfiles GATA-type zinc finger domain profile. 16 52 IPR000679 GO:0006355|GO:0043565
Stsc531g00010 148 PANTHER OS01G0976800 PROTEIN 9 147 - -
Stsc531g00010 148 Pfam GATA zinc finger 22 55 IPR000679 GO:0006355|GO:0043565
Stsc531g00010 148 CDD ZnF_GATA 22 55 IPR000679 GO:0006355|GO:0043565
Stsc531g00010 148 ProSitePatterns GATA-type zinc finger domain. 22 47 IPR000679 GO:0006355|GO:0043565
Stsc531g00010 148 SMART GATA_3 16 66 IPR000679 GO:0006355|GO:0043565
Stsc531g00010 148 MobiDBLite consensus disorder prediction 56 86 - -
Stsc531g00010 148 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 55 - -
Stsc531g00010 148 Gene3D - 17 77 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc531g00010 Stsc-Chr531 33635 34602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc531g00010 12 148 C2C2-Gata Transcription Factor Family AT3G06740 46.377 1.48e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Stsc531g00010 GATA 2.2e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc531g00010 - - qsa:O6P43_011056 149.443