Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc531g00004 ATGAGTACCGAGGAGGAAGTTGCGCCACTCAATACTGTTTCTGTTGTTGAAGACATTCTTCAGAAGCGTGGAGGCCTCTTCGACGACAAGTTGGCGTCACGCCGAGACGAAGAAGCTTCGGCGAGAAGAAATGAAGCTACTGAATGGATGCGTAAGACGCTTGGAGTAGTGGCAGGGAGAGACTTGCCTGCGGAGCCTTCTGAAGAAGACTTCAGGATCGCCTTGCGTACCGGCATTATCCTCTGCAATGTTCTCAACAAAATTGTACCCAATGCAGTTCCCAAGGTAATTCAAGCTCCAAAGGATTCTCCTATAGTTCCTGATGGAACAGCACCGACTGTCGTTCAGTACGTTGAAAATGTGAAGAATTTTATTGAAGCTTTGGGAGGATTGGGGATTCCCACCTTTGAAGATTCCGATTTGGAAAAGGGCGGAAATTTATCAAGGGTGGTGAGTTGTTTGTTAGAGCTGAAATCCTATGCAGAATGGGTACAGGGAGGGAAAATTGGGTCATGGAAATTAGATGGCCTTCCAAATTCAAAGCCACCCTTGATGAAAACGCTTCTAAGGAGAAACTCTGAACCATCCATGATGAAATCCATGGGGAACTCATTAGAGGAAAAAGATACCACTTGTGCTGCTATTGTCAATAATCCTAAGGCTGACCTCAGCGAAATGACTTCCAACTATCCTTCTTTACTTTCACTAGTTCGTGAACATTTGTCAAATAAGAGGACAGAGGAAATTCCTTATGTTGTGGAGTCCCTGCTTGCTAAAGTCATGAATGAATTTGAACATCGGTTGCTTGAGCAACAAGAAAGGCTTAGAACAATTCAACTTGGAAAAGCATCATCATTTAACAAGCTAGAGGAATATCGATTGCCTGAACAACAACAAACGCTTAGACCAATTCATCAAGAAGGAACATTATCAGCCAGACCAGATGAACATCAATTGCTTGAACAACAAAAAGTGCATATTAGAGCAAGTCAACAAGAAAAAGCACCATCATCTAAACCAGATCAGCATCAATTGCTTGAACAACAAGAAACGCAGCTTAGAGCAATTCAAACAGATAAAGTATCATCATCTAAACCAGGACCTTTGGTCTCAAAAGCTACTCCTGTCGACGAAGAGGAATTGAAAACTATAGTCCATCAAACTAAATCAGGAGTGCTAGTTATGCACAAGAAGTACCAGGAAGAGTACCTCATTCTATGCAAGCATGTGCGCAGCTTGGTTTCTGCGGCTTCAGGATATCAAAAAGTTCTTGAAGAGAATCGTAAGTTATACAATCAAGTGCAGGATTTAAAAGGGAATATTAGGGTGTACTGCAGAGTTAGACCCTTCTTGGGCGCTCCTTCACCCACTAACAGTGTTGGTGCCATTGATGATGGAAGCATCTCAATCATAACACCTTCAAATTATGGGAAAGATGGGAGGAAGACATTCAATTTTAACAAATGTTTTGGTCCTACTGCAACTCAAAGTTGGTCCTTTCATTGTGTTCTTCGACTATATTTTTATTTATTTATGTATGTATATGCGTATGCGTATGCGTTACTCACTTCTGGGCCAGATGACCTTACAGAGGATACCATGGGTGTCAACTACCGTGCTCTGAATGATCTTTTCCAAATCCAAGAACAGAGGAAAGACACCATTATCTATGAGATTGGTGTTCAAATGCTTGAGATTTACAATGAGCAAGTCAGAGATCTATTATGCACAGATGGGGCTATCAAAAAATTAGAAATTCGCAACAAAACCACGAATGGCATCAATGTGCCCGAAGCCAACCTTGTTCCTGTTGCAACAACTGTTGATGTCATAAACTTGATGAACTTGGGAAACAAGAATCGAGCTGTTGGTTCTACTGCCATGAACTCTCGTAGTAGCCGTTCTCACAGGTTAGCAGAAATTGTGCTGTTCTAA 1935 0.4181 MSTEEEVAPLNTVSVVEDILQKRGGLFDDKLASRRDEEASARRNEATEWMRKTLGVVAGRDLPAEPSEEDFRIALRTGIILCNVLNKIVPNAVPKVIQAPKDSPIVPDGTAPTVVQYVENVKNFIEALGGLGIPTFEDSDLEKGGNLSRVVSCLLELKSYAEWVQGGKIGSWKLDGLPNSKPPLMKTLLRRNSEPSMMKSMGNSLEEKDTTCAAIVNNPKADLSEMTSNYPSLLSLVREHLSNKRTEEIPYVVESLLAKVMNEFEHRLLEQQERLRTIQLGKASSFNKLEEYRLPEQQQTLRPIHQEGTLSARPDEHQLLEQQKVHIRASQQEKAPSSKPDQHQLLEQQETQLRAIQTDKVSSSKPGPLVSKATPVDEEELKTIVHQTKSGVLVMHKKYQEEYLILCKHVRSLVSAASGYQKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGAPSPTNSVGAIDDGSISIITPSNYGKDGRKTFNFNKCFGPTATQSWSFHCVLRLYFYLFMYVYAYAYALLTSGPDDLTEDTMGVNYRALNDLFQIQEQRKDTIIYEIGVQMLEIYNEQVRDLLCTDGAIKKLEIRNKTTNGINVPEANLVPVATTVDVINLMNLGNKNRAVGSTAMNSRSSRSHRLAEIVLF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc531g00004 644 SMART ch_5 42 160 IPR001715 GO:0005515
Stsc531g00004 644 Pfam Calponin homology (CH) domain 42 162 IPR001715 GO:0005515
Stsc531g00004 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 642 IPR027417 -
Stsc531g00004 644 SMART kinesin_4 438 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc531g00004 644 CDD CH_AtKIN14-like 42 159 - -
Stsc531g00004 644 SUPERFAMILY Calponin-homology domain, CH-domain 33 169 IPR036872 -
Stsc531g00004 644 Gene3D Kinesin motor domain 382 643 IPR036961 -
Stsc531g00004 644 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 638 IPR027640 GO:0003777|GO:0007018
Stsc531g00004 644 ProSiteProfiles Kinesin motor domain profile. 440 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc531g00004 644 Pfam Kinesin motor domain 470 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc531g00004 644 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Stsc531g00004 644 Coils Coil 420 440 - -
Stsc531g00004 644 Gene3D - 32 164 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc531g00004 Stsc-Chr531 11010 16224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc531g00004 428 643 Calmodulin-binding Proteins AT5G65930 27.111 7.81e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc531g00004 K10406 - gmx:100799535 592.808