Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc52g00014 ATGAATACGACGCCGTTTATGGACAAGCAGATTATGGATCTCTCCCACTCAGGATCTTCACAGAGCAAGGACCTCATCGACCTCATCAACAACAACAATAATCACAAACACAAAACCACTGATGAAGAAGATGAACGCGATGAACATCATGAAACCCTAAATAGTAATAATAATGATAATAATCTCAATGGGATTGGGGTTACCAAAGATGACATCGTTCCTAGCTACGATTTTCAACCCATTCGCCCCCTCGCCGCTTCTTCTTCCCCTAATTACGATTCTGCCCCCAATTTGGCGGCTGCTGCTGCTGCTAGTTCTTTCTCAACGAGGTCATGGAACTCCGATTCCAATGCCAACACTTCCCCTCCGCGCCCTCTCATCAAAAGTTACAGTTCTCTGGATACTATTGAACCTACAAAGGTTGCTGCTGTAGGAAAGGACCAAAAGACTTCTGATGCAACAATTCTGTCTGAAATTGATCAAACCATGAAGAAACATATGGACAATTTGCTTCATGTTATGGAAGGTGTTAGTGCGCGGTTAACACAGCTAGAAAGCCGAACCCACCGACTTGAGAATTCTGTGGATGATTTGAAGGTATATGTTGGAAACAATCATGGAAGCACTGATGGAAAACTAAGGCAACTGGAGAATATTCTTCGAGAGGTGCAAACAGGGGTGCAAACCATCAAGGATAAGCAAGATATATTGGAAGCTCAGCTGCAGCTGGCTAAGCTGCAAGTGTCGAAGACAGATCAGCAGTCAGAAAGTCAAACTAGTATGGTTACAAATCCTGTCCAGCAAGATGCATCAGCACCCCAGCAATCTCAGCCACAGCTTCCTCATCCGGCTAATCTTCCACAATCAATTCCTGCAGTTCCTTCACCTAATGCGCCTCCTCAACCTTCCCCTCAACAGGGATTGCCACCTCCAATTCAACTTACAAATCAATTCCCTCAGAACCAAATCCCAGCTGTTCCTCAGAGAGATTCATACTTCACCCCACCACCACCTGTTCAACCACAGGAGGCCCCGAATCAGCAATACCAAGTGCCTCCAACTCAGCAGCCACATCCTCAGGTGGGGGCGCCTCCACATCAACAGTATCAACAGCCCCCTCATCCCCAGTTCCCTCAGCCAACGCCTCATCTACCTCAACAGCAGCCAGCACCTCATTTACCTCAACAGCAGCCATCAATTTCACCCGTAAATCTGCCGCAAGTTCAATCTTCACTTGGCCAGCATGTTGAGGAAACACCTTATGTTCCTTCTCAAAACTATCCACCTAATCTCCGCCAGCCAACATCTCAGCCACCTGGTGGACCTCCGCCTACCCAACAGTACTATGGCGCACCAACCCATGTGTATGAACCACCATCGAGTAGACCTAATCCAGGCTATTCTTCTGGATATGGTACATTATCAGCTCCTGCTGAGCCATACCGTTATGGCGGATCATCACAATATGGTGGCACGTCTGCACCCAAGGCTCAACAGCTGCCTACTGCTTCATCAGTGGCTCCAAGTGGTGGAAGTGGTTACCCTCAACTCCCAACTGCTCGTGTACTACCACAGGCATTACCAACTGCATCCGTAGCAGGTGGGGGTTCGGGTTCTCCCGGAGGTGGGAATAGGGTTCCCATCGATGATGTAGTCGACAAAGTTGCTAGTATGGGATTCCCTAGGGACCATGTAAGGGCAACTGTTCGGAAGCTGACGGAGAATGGCCAATCAGTTGACCTGAATGCAGTGCTGGACAAGCTTATGAATGATGGTGAACTGCAAACAAGAGGTTGGTTCAACCGGTAG 1809 0.482 MNTTPFMDKQIMDLSHSGSSQSKDLIDLINNNNNHKHKTTDEEDERDEHHETLNSNNNDNNLNGIGVTKDDIVPSYDFQPIRPLAASSSPNYDSAPNLAAAAAASSFSTRSWNSDSNANTSPPRPLIKSYSSLDTIEPTKVAAVGKDQKTSDATILSEIDQTMKKHMDNLLHVMEGVSARLTQLESRTHRLENSVDDLKVYVGNNHGSTDGKLRQLENILREVQTGVQTIKDKQDILEAQLQLAKLQVSKTDQQSESQTSMVTNPVQQDASAPQQSQPQLPHPANLPQSIPAVPSPNAPPQPSPQQGLPPPIQLTNQFPQNQIPAVPQRDSYFTPPPPVQPQEAPNQQYQVPPTQQPHPQVGAPPHQQYQQPPHPQFPQPTPHLPQQQPAPHLPQQQPSISPVNLPQVQSSLGQHVEETPYVPSQNYPPNLRQPTSQPPGGPPPTQQYYGAPTHVYEPPSSRPNPGYSSGYGTLSAPAEPYRYGGSSQYGGTSAPKAQQLPTASSVAPSGGSGYPQLPTARVLPQALPTASVAGGGSGSPGGGNRVPIDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGELQTRGWFNR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc52g00014 602 MobiDBLite consensus disorder prediction 30 54 - -
Stsc52g00014 602 Coils Coil 213 247 - -
Stsc52g00014 602 Gene3D - 158 263 - -
Stsc52g00014 602 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 600 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 251 519 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 310 328 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 284 309 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 1 29 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 251 283 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 397 431 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 366 396 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 432 446 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 344 365 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 1 68 - -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 486 512 - -
Stsc52g00014 602 Pfam UBA-like domain (DUF1421) 548 592 IPR010820 -
Stsc52g00014 602 MobiDBLite consensus disorder prediction 108 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc52g00014 Stsc-Chr52 119116 122344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc52g00014 10 333 Trihelix Transcription Factor Family AT5G14540 43.976 7.39e-66 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc52g00014 - - adu:107490056 920.998