Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc526g00001 ATGGCTGAACCCCATCATCATCAGAGTTTGAAAATCATTGAGCGATGTTCAATTTCACCTCCGCCCAATTCCGTTCCACCAACCTCAATTCCTCTAACATTCTTGGACCTCCCATGGTTCCTCCTCCCTCCGCTGCAACGCATCTTCTTCTACGAGCTTTCTCAACCAAACCAAATCATGGAAACTGTGGTTCCCACTCTCAAACACTCTCTTTCACTCACTCTCAAACACTTCTTTCCCTTTGCCGGAAACATTGTTGTGCCTCCTCAACCCAATAACATATTACCTCACATCCTCTACTCCAATGGTGACTCAGTTCCTTTCACTGTGGCTGAGTCAAATCAAGATTTTAACTATTTTGTCAATCATGCTCCAACAGATCTTACACACATCAACTTTCTTGCTCCGGTGTTTCCTTCTCCGCGTACAAGGCAAGACGGTGCAAAGTTGCTTCCTCTTCTGGCGGTTCAGATCACTGTACTACCCAACTATGGCTTTAGCATGTGCATCGGCTTTAATCACGTTGTTGCTGATGGAAGAGCCTTGCATCAATTCATCAAGTTCTGGGCTTCTGTTTGTAAGTCTAGAGGTGAAGACATGGATTCCATTCAAGAATCTCTTCAACTGCCACTACACAACAGAGACACCATTATCGAAGACTCGAACGAGCTAAAGTTCGTTTTCTTGGAGGAACTTTCTAGTTCTTTTCCAAAGATCGTGGAATCTTTTGGCACACCTGTTGATGTTCCCAATGACAAGGCTCGCGTTACGTTTTCACTGAGCCGCGAGCAAGTGGAGAAAATCAAGAAATGGATAACCAATGAATGCAACAAAATTGGGTTAAAGACAGAGTCGTTGCGCATATCGACCTATGTGGTGACTTGTTCTTTGCTTTGGGTTTGCCTGGTAAAATATTATTACAAAAACACTCACGATGTTGGTAATAACAGCGTTAGCTGTGAAACATGCAAGTTTATATTCCCAGCAGATTGTCGAAACTGTCAAGAATTGTCTATTCCATCCACATACTTTGGAAACTGCATTAATCGGCCGGTAGTGGAACTCGAGAAGAGCAAGCTAGTGGGAAAAAATGGGATTGTTGAAGCAGCTATTGCTATTGAAGGCATAATTAGAGAGTTTAAGTGTGACGGTTTTAAAGGGATTGAAAATTTGGTGTCACATTTGAAGGAGTTCAAGAAACCAGAAGGATGTAAAGTAATAGCTACAGGGTCTGCAAAGCATGGTGTTTATGAAAGTGATTTTGGGTGGGGAAAGCCCAAGAAAAGTGATTCAGTTCATGTAATGCCTTCAAAGATATTCACTCTTTGTGATTCTAAGGATGGTAGTGGTGGAGTTGAAATTGGACTCACCCTTGAAAGGAATCAAATCGAATATTTCAATAGTGTTATGAAAGAACACATTAGAAGTATTGTAGGTTGTGATTAG 1446 0.4184 MAEPHHHQSLKIIERCSISPPPNSVPPTSIPLTFLDLPWFLLPPLQRIFFYELSQPNQIMETVVPTLKHSLSLTLKHFFPFAGNIVVPPQPNNILPHILYSNGDSVPFTVAESNQDFNYFVNHAPTDLTHINFLAPVFPSPRTRQDGAKLLPLLAVQITVLPNYGFSMCIGFNHVVADGRALHQFIKFWASVCKSRGEDMDSIQESLQLPLHNRDTIIEDSNELKFVFLEELSSSFPKIVESFGTPVDVPNDKARVTFSLSREQVEKIKKWITNECNKIGLKTESLRISTYVVTCSLLWVCLVKYYYKNTHDVGNNSVSCETCKFIFPADCRNCQELSIPSTYFGNCINRPVVELEKSKLVGKNGIVEAAIAIEGIIREFKCDGFKGIENLVSHLKEFKKPEGCKVIATGSAKHGVYESDFGWGKPKKSDSVHVMPSKIFTLCDSKDGSGGVEIGLTLERNQIEYFNSVMKEHIRSIVGCD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc526g00001 481 PANTHER - 10 475 - -
Stsc526g00001 481 Pfam Transferase family 12 471 - -
Stsc526g00001 481 Gene3D - 5 238 IPR023213 -
Stsc526g00001 481 Gene3D - 249 477 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc526g00001 Stsc-Chr526 11621 13574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc526g00001 13 472 Monolignol Biosynthesis Gene Families AT5G48930 21.053 1.79e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc526g00001 - - gmx:100797294 424.476