Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc524g00006 ATGGCTGTGAATGAGTCCCTTGCTGGGTCGAATGAAGAAATTGATCGTGTTTCAACTATCAAGGCAACTAAACTCGGATGGAATTTGGTTGTTGGTGTGGTGCGCTTATATGAGCTACCTAACCAATGGATTTCCAAGGACGCTACAAGCGTTGAGATGGTTCTCCAGGATCAAAACGAAGGTGAGTGTTGGATTCTTGGCAATATCGTTTCTGTTGAGAGTGGTGTCCATGATTGGTGCTACTTAGCATGTAACAACTGTCCTAAGAAAGTCATTGAGGTGAAGAATGGATACAAATGTAAAAAGTGCTTGAGAATCCTTGCTGATCCACCTGTGAGATATAAGCTGAATATTATAGTTGCTGATGGAACTGGGTGCTTGAATCTGATTGTTTGGAGCCAAGAGGGAAAGCTCATTCTTGGGAAATCTGCTAATGAAGTCAGAGCTTTGCAAGGAACGAACCAGACTTTGTCAAACCCCGTGTCTACTGTGGTTTCTGCAGAAATCGATTCAGACCTTAATGTTGCTGCTATTGTCTCCTTATCAAAG 549 0.4262 MAVNESLAGSNEEIDRVSTIKATKLGWNLVVGVVRLYELPNQWISKDATSVEMVLQDQNEGECWILGNIVSVESGVHDWCYLACNNCPKKVIEVKNGYKCKKCLRILADPPVRYKLNIIVADGTGCLNLIVWSQEGKLILGKSANEVRALQGTNQTLSNPVSTVVSAEIDSDLNVAAIVSLSK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc524g00006 183 SUPERFAMILY Nucleic acid-binding proteins 53 156 IPR012340 -
Stsc524g00006 183 Gene3D - 8 175 IPR012340 -
Stsc524g00006 183 Pfam Replication factor-A C terminal domain 78 156 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc524g00006 Stsc-Chr524 35556 37867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc524g00006 81 152 Core DNA Replication Machinery Family AT5G61000 35.616 3.40e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc524g00006 - K07466 adu:107487627 117.472