Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc51g00016 ATGGGGAAGAAGCAGAAAGATAAGATAGTTCTCCCACCGGACCTCCCGCCGGAGATTCCCGACGACGAGGTCGAGGTCTCCGACGAGGACCTCCAATTCGTCAATGAGAATCGCGGTTACGCTTCCTTATTCTCCACCCTTGACACTCAATCAATCACCAAGCATGTTACTCGAGTTGCTGATGCTAAAGATGATGCTTTGGAGAAACTTTATGAGAAACGGCTGCGAAAGAATGCTCTCAAGAAGGAAAAAGAAGAAACAGGAATACAGGTTGACCGAGTTGATGCTCTTCCAATTAAATCTTTGGATGGACAACTCTATTACCGAACAGCTGCAAAGGCAGAATCACAAAATGGTCCAAGTGAAGAGGAAACAGGGGAGGATGGAAATGATGACAAAGGTCTGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAGCTTAAGAAGTTGAGAAAGGAGGGAAAAAAACAAGGAAAAGAGGTGCCAAAAGAAGAAGTGGAACAAACACCACAATCTGCCGTACTGGCTGAGGTAAAAGAAGATCTTACAACTGAGGAGGCTTTTGAATCTAAGAAGAGTAAGCTTGCAGAGTTGGGAAATGCGTTACTTACAGATCCTGAATCCAATATTAAATTTTTGAAGGATATGGTACAGATATGTAGAGATAATGATCCAACCATTGTTAAACTTGGACTTCTGTCACTCTTGGCTGTATTTAAAGATATTATCCCTGGCTATCGAATAAGGCTTCCTACTGAGAAAGAACTGGAAATGAAGGTTTCAAAGACTGTGAGAAAGATGCGTTATTATGAATCAACTCTACTTTCTTCATACAAGGCATATCTGCAAAGGCTGATGTACTTAGAAAAGAAGCCTTTATTTCAACTTGTAGCAGTTCGTTGTATTTGTACATTGCTTGATGCACATCCCCATTTTAACTTTAAGGAAAACCTGTTGGATGCTACTATCAGAAACATAAGCTCTACTAATGAGGCCATAAGGAAACTTTGTTGTTCTACAGTTAAATCACTGTTTACAAATGAGGGTAAACATGGCGGTGAGAGTACTGTAGAAGCTGTTCGATTGATTGCCGATCTTGTAAAGGCTAATAATTGTCAGTTGCATCCTGATTCCATTGAGGTATTTTTGTCTCTTTCATTTGATGAGGATCTTGGGAAGCCTGAGAAGAATGATGAGGACCAGAAATTTAAGAACAAGAAAAATAAGAAGAGAAAGAACATGGAGGGATTAAATCAGTTGCCAGATAATGACCGAAAGAGAAGTAGGCTTGAATCGAACTCTAAGACAAAAGAGGAGGTTGAAGCTGAGTACAAGGCTGCATCTTTTACCCTAGATGTTGCAGAGAGGAGACAAATGCAATCTGAAACACTCTCTGCCGTGTTTGAGACATATTTTCGCATTTTGAAGCACACAATGCATTCTATAGCAACCAGGCCTGAAGTAAATACTGGGGCATTATCTGCTACGGTGGAACCCCACCCATTGTTTGCTCCTTGTCTTAAAGGACTGGGAAAGTTTTCACATTTGATTGACCTTGACTTCATGGGGGACCTAATGAACCATCTCAAAGTTCTTGCTTCTGGCGGTAGCAACTCAGGTAACAGTTCCGAGAAGTGTCCTAAAGTTTTGACCGTGACCGAACGTCTCCAATGCTGCATAGTTGCCTTTAAAGTGATGAGGAATAATCTTGATGCTCTGAATGTTGATTTGCAAGACTTCTTTGTCCATCTTTACAATCTTATCATGGAATACAGGCCTGGAAGAGATCAAGGAGAGGTCTTAGCCGAGGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAAACTGCTGCATTCATAAAACGTTTGGCTACATTGTCGCTGTGTTATGGTTCTGCTGAGTCCATGGCTGCATTGGTCACAGTAAAGCATCTCCTTCAAAAGAATGTGAAGTGCAGAAATCTGTTGGAAAATGACACCGGAGGGGGCTCAGTTTCTGGAACAATTCCAAAATATCTACCGTATTCCATGGATCCCAATTTAAGTGGAGCTCTTGCCTCAGTGCTTTGGGAACTCAATCTGTTGTCCAAGCATTATCATCCTTCTATATCAACAATGGCCGCTGGCATATCAAGTATGAATGTTGCACAGAACCAAGTCATTCTCTCCAAAACCTCTCCTACACAAGCTTTAAAGGAGATGTCTCTTGATCAGGAATTAACTTCCCCACAACATAATGGCACTATAAAATTGAATAACAAGAAGAGAAGAACAAATGATCCTGCAGTATCACCATCCCCTAGTTCTACATCAGTCGCATCAAGTTCATTCGACGAGGACGAGTTGCGCAAGAAACTCGGTTCCCATTTCATGCTTCTTCGCGACATTAGGGAGAATGGAAGGTTGAGAAAGCAGTTGGATAAGACTACCCTATCACTACAGCTATATGAGCAATATAAGAAACAAAAGCAAAGATCAAAACCGAAAAAGAAAGCCATTGCTTAG 2517 0.4132 MGKKQKDKIVLPPDLPPEIPDDEVEVSDEDLQFVNENRGYASLFSTLDTQSITKHVTRVADAKDDALEKLYEKRLRKNALKKEKEETGIQVDRVDALPIKSLDGQLYYRTAAKAESQNGPSEEETGEDGNDDKGLVKLTKAEKRAKLKKLRKEGKKQGKEVPKEEVEQTPQSAVLAEVKEDLTTEEAFESKKSKLAELGNALLTDPESNIKFLKDMVQICRDNDPTIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSSYKAYLQRLMYLEKKPLFQLVAVRCICTLLDAHPHFNFKENLLDATIRNISSTNEAIRKLCCSTVKSLFTNEGKHGGESTVEAVRLIADLVKANNCQLHPDSIEVFLSLSFDEDLGKPEKNDEDQKFKNKKNKKRKNMEGLNQLPDNDRKRSRLESNSKTKEEVEAEYKAASFTLDVAERRQMQSETLSAVFETYFRILKHTMHSIATRPEVNTGALSATVEPHPLFAPCLKGLGKFSHLIDLDFMGDLMNHLKVLASGGSNSGNSSEKCPKVLTVTERLQCCIVAFKVMRNNLDALNVDLQDFFVHLYNLIMEYRPGRDQGEVLAEALKIMLCEDKQHDMQKTAAFIKRLATLSLCYGSAESMAALVTVKHLLQKNVKCRNLLENDTGGGSVSGTIPKYLPYSMDPNLSGALASVLWELNLLSKHYHPSISTMAAGISSMNVAQNQVILSKTSPTQALKEMSLDQELTSPQHNGTIKLNNKKRRTNDPAVSPSPSSTSVASSSFDEDELRKKLGSHFMLLRDIRENGRLRKQLDKTTLSLQLYEQYKKQKQRSKPKKKAIA 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc51g00016 838 MobiDBLite consensus disorder prediction 762 780 - -
Stsc51g00016 838 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 821 IPR016903 -
Stsc51g00016 838 MobiDBLite consensus disorder prediction 393 441 - -
Stsc51g00016 838 MobiDBLite consensus disorder prediction 412 441 - -
Stsc51g00016 838 Pfam CBF/Mak21 family 556 711 IPR005612 -
Stsc51g00016 838 MobiDBLite consensus disorder prediction 742 782 - -
Stsc51g00016 838 MobiDBLite consensus disorder prediction 1 22 - -
Stsc51g00016 838 SUPERFAMILY ARM repeat 205 618 IPR016024 -
Stsc51g00016 838 MobiDBLite consensus disorder prediction 112 171 - -
Stsc51g00016 838 PIRSF Noc3 1 835 IPR016903 -
Stsc51g00016 838 Pfam Nucleolar complex-associated protein 191 281 IPR011501 -
Stsc51g00016 838 Coils Coil 423 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc51g00016 Stsc-Chr51 114931 120951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc51g00016 1 810 Core DNA Replication Machinery Family AT1G79150 57.282 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc51g00016 K14834 - gmx:100776136 1208.36