Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc51g00002 ATGGAGGAAATTAAAGGCTTCAATTGTGGTGAAAGTAAAAGCCCCATTCATGGTAGACCTCCCAATCCACCTTCTTCTTCTCCTGCTTCCCCCTTTCGCCAATGCCATCACAACAACAAACCCCTTGTTCGCCATCCTTCTCTTATGATGACGAAGCTTTCTGATGTGTCTGCTGAACCGGAGTGTGCCACTGAAGATTGTCAGTCTGATTTCCTTCCAAAGCTTCGTTCTGGAGCATGTGCTGATATGGGGTTCCGGTCAAGTATGGAAGATGTTTATGTTTGCGTTGACAACTTTACACAAGAGAATGGGCTCAAGAACGATACAGAGGGACCTAGTGCTTTCTATGCGGTATTTGATGGACATGGTGGAAAGCATGCCGCTGACTTTGCTTGCCACCATTTGCCGAGGTTCATTATTCATGATGACAATTTCCCAAGTGATATTGAGAGGATAGTTACTTCAGCATTTCTACAAACGGACAATGCTTTTGCTGAAGCTTGCTCTCTAGATGCTAACCTTGCATCTGGTACTACGGCATTGGCTGCTCTTGTTATTGGAAGGCAGCTGGTGGTAGCAAATGCTGGAGATTGCCGAGCGGTGTTGTGTCGCCGTGGGAAAGCAATTGAAATGTCAAGAGATCATAAACCTGTGTGCATGAAAGAGAAGAAGCGTATTGAGGCATCCGGGGGATATGTCTATGATGGATATCTTAACGGACAGCTTAATGTCGCTCGTGCTATTGGCGACTGGCACATGGAAGGGATGAAAAGCCGGGGTGGGGGACCACTAAGCTCAGAACCTGAGTTTATGAGTACAAAACTCACTGCCGAGGATGAATTCCTCATCATGGGTTGTGATGGGATTTGGGATGTATTTAGGAGCCAGAATGCAGTGGATTTTGCTCGCCGCAGGCTTCAGGAGCATAATGACCCCAACATGTGTAGCAAGGATTTAGTTGATGAGGCGCTAAAAAGAAAGAGTGGAGACAATTTATCTGCTGTTGTAGTTTGCTTCCAGCAACAACCTCCGCCTAACTTGGTAATGCCGCGCTCTAGAGTGCACAGGAGCTTCTCCGCCGAAGGTTTGAGGGAGTTGCAAAGCTTCCTGGATAGCTTAGGTAATTGA 1128 0.4681 MEEIKGFNCGESKSPIHGRPPNPPSSSPASPFRQCHHNNKPLVRHPSLMMTKLSDVSAEPECATEDCQSDFLPKLRSGACADMGFRSSMEDVYVCVDNFTQENGLKNDTEGPSAFYAVFDGHGGKHAADFACHHLPRFIIHDDNFPSDIERIVTSAFLQTDNAFAEACSLDANLASGTTALAALVIGRQLVVANAGDCRAVLCRRGKAIEMSRDHKPVCMKEKKRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKSRGGGPLSSEPEFMSTKLTAEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPNMCSKDLVDEALKRKSGDNLSAVVVCFQQQPPPNLVMPRSRVHRSFSAEGLRELQSFLDSLGN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc51g00002 375 MobiDBLite consensus disorder prediction 1 36 - -
Stsc51g00002 375 FunFam Probable protein phosphatase 2C 22 60 342 - -
Stsc51g00002 375 ProSiteProfiles PPM-type phosphatase domain profile. 76 339 IPR001932 -
Stsc51g00002 375 PANTHER PROTEIN PHOSPHATASE 2C 63 337 IPR015655 GO:0004722|GO:0006470
Stsc51g00002 375 SMART PP2C_4 66 337 IPR001932 -
Stsc51g00002 375 Gene3D - 53 343 IPR036457 -
Stsc51g00002 375 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Stsc51g00002 375 SUPERFAMILY PP2C-like 70 341 IPR036457 -
Stsc51g00002 375 CDD PP2Cc 76 339 IPR001932 -
Stsc51g00002 375 Pfam Protein phosphatase 2C 77 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc51g00002 Stsc-Chr51 15721 18518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc51g00002 1 375 PP2C-type Phosphatase Gene Family AT2G25620 66.327 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc51g00002 K14803 - gmx:100815725 607.831