Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc514g00006 ATGGACGAGGACCAAGAGATGGAGAGGTTCGAAGTCGACAACGATTTCGAAGGAGGCCAGTGGATTGGCGGCGAATTCTACTACAAGAAGCGCAAAGAGAAGCGCTCTCAGACCAGAGACGATGTCCTCTACGGTGTTTTTGCTGGCTCCGACGATGACGACGACGACGATTACTCCACTAAGAAACGCAGGAAGGACCTTTCCAAGAAGCAGGACCTCTCCAAGCCGGTAAATTTTATTTCTACTGGTACTTTTATGCCCAATCAAGATGCTGTTGATAACAATAGGGATTCTAAAGAACATGCTGAGAACGATGGTTATGTTAGTGAGGATAGGCCAGGTTTAGGTCTTGGAATGGGATCTGCTACCACTTCAGGTGCTGGTTTAGGGTTTAATAGTAGTAATAATGTTAGGAATAATGGTTCTGATGAGAATGTTGATGATGGTGGTGATAGTAGTTTTTTGCCTACGGCTTTTGGGAAGAAGATTAAGGAAGGGGCGATGCGGAGGGAGAAGGAAAGAGAGAGGGAGAAATTGGAGAAGAAGAGGGGTCAGCGGCAGAATTCGGATCAAGACGGGTTCGGTAATGTTGGGAAATTCTATAACAATGGAATTGGGATGAAGCTGTTGGAGAAGATGGGTTATAGAGGCGGTGGTCTTGGAAAGAACGAGCAAGGTATTGTGGCTCCTATTGAGGTGAAAATGAGGGCTAAGAATTCAGGTATTGGGTTTAGTGATGCGAAGGAGGCGCCGCCACCGCCATTGCCTATTCTGCAGCAACAGAACAAAAGCTCGGTGGGAGCAGTGCAGCCTGCGGCTGGAAGAACAAAGGAGAGAATGTGGTCAAAGCAGTCGCGGCTGAAGAAGAAGAAAGAGGAGGAAGTGTATGTTACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAGGATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCGCAAGTTCGGGTTTATACAAATTTGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAGGAGGATGTCCCAATGCCAGAACTTCAGCATAACGTTGGATTGATTGTTCGGTTGGCTGAGGCTGACATTCAAGAGATTGATAGAGATTTGAGGAGAGAAAGGGAGACAGCTCTCAGCTTGAAAAGGGAAAAAGAAAAGTTAGAAGCTGAAGCAGCTTTCCAAAAGAGTCAACTAGATAATATGGAGGAAATAATGAGTGTCTTGGACCGAGTAGCAGAAGAGAGCACTTCAGGAACACTAACATTAGATTTCCTTGCTAGATGCTTCAATGACTTGCATAAGAGTTATGCCGATAGCTACAAGTTGTCTGTCAGAATATCTGGTATCAATACATGGCAGGCACGGGATCCTGAGCCAATGCTACGATTTCTTGATTTGTGGGAGAAGTTGCTTCCTCCTTCAGTCCTCACTGCCATATTGGACAATATAGTCTTGCCAAAATTATCGGCTGCTGCAGATACTTGGGAACCACATCGTGAGACCATTCCTGTCCACACTTGGGTGCATCCATGGCTACCACGGATGGAACACAAGTTGGAAGGTATTTACCAGGTCATTCGCTTTAAATTGAGTTCTGTTCTTGGTGCCTGGCATCCAAGTGATGCCTCTACGTATACCATATTGTCTCCATGGAAGACTGTCTTTGACGCTGTGAGTTGGGAACAACTTATGCTTCGATTCATTGTGCCTAAATTGCAACTCGTCTTGCAAGAGTTTGAAGTCAACCCGGCAAGTCAGAAGCTTGATCAATTTTTTTGGGTGATTAAATGGGCTTCTGTGATTCCAATTCATATCATGGTGGACATGATGGAGAAGTTCTTCTTCACAAAGTGGCTTCAGGTTTTGTATCACTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTATGAAGTGGTATAATGGCTGGAAGGAGCTTATTCCAGAAGAACTACTGGCAAATGAAAGTATTCGGTTCCAAATTAATCGTGGTCTAGATATGATGAGTCAAGCTGTTGATGGAATGGAGGTTGTCCAACCTGGTTTGAAGGAGAATATCAGCTATCTTCGGGTACGTGAGCAACGCCAATTTGAGGCTCAGCAGAAAGCAGCAACCTATGCTCAACAACAAGCCGCCACAGCAATGGGCGGTGCCAATGCAGATGGTGTGCATGAACTGAGCTTGAAAGAAGTCATTGAGGCCCATGCCCAGCATCATGGTTTGCTGTTCAAGATTAAGCCTGGTAGAATGCACAACGGTCACCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGACTCTCTACATCAAAAGGTATATGCTCAACATGAGGAAACATGGTCCTTGGAATCTCTTCAAGGATTGCTAGAGTTGCATAATAAATCCCTTAGTAAAAGACACTGA 2409 0.4479 MDEDQEMERFEVDNDFEGGQWIGGEFYYKKRKEKRSQTRDDVLYGVFAGSDDDDDDDYSTKKRRKDLSKKQDLSKPVNFISTGTFMPNQDAVDNNRDSKEHAENDGYVSEDRPGLGLGMGSATTSGAGLGFNSSNNVRNNGSDENVDDGGDSSFLPTAFGKKIKEGAMRREKEREREKLEKKRGQRQNSDQDGFGNVGKFYNNGIGMKLLEKMGYRGGGLGKNEQGIVAPIEVKMRAKNSGIGFSDAKEAPPPPLPILQQQNKSSVGAVQPAAGRTKERMWSKQSRLKKKKEEEVYVTAEELLASKQEQDLEVVQKVYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNVGLIVRLAEADIQEIDRDLRRERETALSLKREKEKLEAEAAFQKSQLDNMEEIMSVLDRVAEESTSGTLTLDFLARCFNDLHKSYADSYKLSVRISGINTWQARDPEPMLRFLDLWEKLLPPSVLTAILDNIVLPKLSAAADTWEPHRETIPVHTWVHPWLPRMEHKLEGIYQVIRFKLSSVLGAWHPSDASTYTILSPWKTVFDAVSWEQLMLRFIVPKLQLVLQEFEVNPASQKLDQFFWVIKWASVIPIHIMVDMMEKFFFTKWLQVLYHWLCSNPNFEEVMKWYNGWKELIPEELLANESIRFQINRGLDMMSQAVDGMEVVQPGLKENISYLRVREQRQFEAQQKAATYAQQQAATAMGGANADGVHELSLKEVIEAHAQHHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLHQKVYAQHEETWSLESLQGLLELHNKSLSKRH 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc514g00006 802 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 446 789 IPR045211 GO:0000390
Stsc514g00006 802 MobiDBLite consensus disorder prediction 46 196 - -
Stsc514g00006 802 Pfam GC-rich sequence DNA-binding factor-like protein 442 624 IPR022783 -
Stsc514g00006 802 Pfam G-patch domain 203 243 IPR000467 GO:0003676
Stsc514g00006 802 MobiDBLite consensus disorder prediction 163 188 - -
Stsc514g00006 802 PIRSF TFIP11 1 445 IPR024933 -
Stsc514g00006 802 PIRSF TFIP11 445 797 IPR024933 -
Stsc514g00006 802 MobiDBLite consensus disorder prediction 55 72 - -
Stsc514g00006 802 Coils Coil 358 406 - -
Stsc514g00006 802 SMART G-patch_5 200 245 IPR000467 GO:0003676
Stsc514g00006 802 MobiDBLite consensus disorder prediction 125 147 - -
Stsc514g00006 802 MobiDBLite consensus disorder prediction 74 92 - -
Stsc514g00006 802 MobiDBLite consensus disorder prediction 93 108 - -
Stsc514g00006 802 Coils Coil 169 192 - -
Stsc514g00006 802 Coils Coil 289 309 - -
Stsc514g00006 802 ProSiteProfiles G-patch domain profile. 202 247 IPR000467 GO:0003676
Stsc514g00006 802 Pfam Tuftelin interacting protein N terminal 4 103 IPR022159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc514g00006 Stsc-Chr514 28892 31514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc514g00006 199 243 C2H2 Transcription Factor Family AT5G26610 46.667 4.64e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc514g00006 K13103 - gmx:100783256 1122.84