Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc50g00024 ATGGAAGTAAGGGAAGAAGACATAAGAGTGGTGGTGGAGAGCAACGATTTGGTGGAGTGGATAAATGGTAAAGAGGAGACAGACACACTGGAATCGAAGGTTATGGAAGCTGCTGCAATAATGACAATTGTATTGGTCAATGGAGGAAGAAAACCACCAGATTGGCCAGATTTTCTAGGAATAATAGTGCTGCTAATTACCAACCCCACCGTTAGCTTTATAGAAGAAAATAATGCAGATAATGTTGCTGCAACACTAATGACAAGTCTTGCTCCAAAAGCCAAGGTTTTAAGAGATGAAAAATGGAAATAG 312 0.4006 MEVREEDIRVVVESNDLVEWINGKEETDTLESKVMEAAAIMTIVLVNGGRKPPDWPDFLGIIVLLITNPTVSFIEENNADNVAATLMTSLAPKAKVLRDEKWK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc50g00024 103 SUPERFAMILY Calcium ATPase, transmembrane domain M 33 92 IPR023298 -
Stsc50g00024 103 Gene3D - 30 101 - -
Stsc50g00024 103 PANTHER CALCIUM-TRANSPORTING ATPASE 31 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc50g00024 Stsc-Chr50 154452 155007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc50g00024 34 102 Primary Pumps ATPases AT2G07560 72.464 5.30e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc50g00024 K01535 - cit:102623144 114.005