Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc507g00001 ATGGCCAGGAAAGTTCATACCCATAAGAGACATAATGAAGGTATGAGTAGTAATCCTCAACATAGCATCAAGCTGCAAGAAGAAGCTAAATCACATAATTCTACTAAAGGATCAAAGAACTATGGTAATTCAAATGTGACTCAAGAGTTATCTAAACAATCATGCAACCGAGGAAACAACGTTCCAAGCATCGTGGCGAGGTTGATGGGATTAGATATCATGCCAGTACAACATCATCAAAATATGGACATTGATGATGATGGATTGGGAAAAGAATTCACAAATCCAATGCTGCTTCGGTCGCATCCGCAGGAAGAAGAACTCAAGAAATTCAAGAGAGAATTCGAAGCATATCAAGCATCAAGGCTTAAGGAGGATCCAAAATTCAATGAAAGAACAAAGAGTGTTCAAGAAATAATGGTGCCTTGTAATGCAAGTTTAAAGACAAAGACAATAAAGAAATCTAGAAGCAGATTTGATGGTATGTCACTTTCACCAACTCAGATAACTGTCTTGAAGCCTTGTTGCAACCATGAAAAAGAAGAGAGTTTGAAAACAAGTACTAGTATAGAAGATTTTCTTGAGCAAGTTAAAGTGAGGTTGTTAAGTGAAATCCAAGGGAGAAAAAGTACTTTCGAAAAGTCTTCTTCGGTTCGAGGAAGCGAAAATGAGAGACATAGATCAAGTGAGGTCACAAATTTACTCCATTCACAATCGGCGAGATCTTACACAAGTGAAATCGAGCTCAAGGGACAGAGTTCCCCTGAATTTATCAGCAGAGGAACAAGGAGATTAGAAAGACTAAGAAACTTTGTGAATTCTGAAAATCTGAATGATGATGCAATGATGATTCTTGAAAGATCCTTTTCTGCTCCTCTATCAGGGAAATATTGCCGGATTCCGATCGGCGATCATATTTGGGAGAAGCTTGATGAAGATCTTGAAAGGATGCTACCTTTTGATGCTAACAAGAAGAAGCAGAAGAAAGATAGATTTGGTATTAAGGAAAAAGTTTCAAATCTTAAACAAAAGTTTGGTCTAAGAGGGAAGGTTTTTGCTAAAAGGATTCATTCAATGGTTGAAACTCAAAATAGCAATGAAGATGGATTCATGGTGAGAGATATCAGAAGTGGACCAACTGTTCTCATGAAACATTGGAGAAGCCATGATAACTTCACTGAGGTACCTCCTAGTCCTGCATCTTTCTGTAGCAGTGTTAATGAAGAACTTTGGTGCCAGAATGAATTCTTAAGCCCAATTTCAACTCCAGGTTTATCTTCAGTAGATGATAGCATCATGCCACAGGTTTATGGATATATAAGCTATGATTTAAATGAGTTAAGTAAGCAACTAAGTCAACTTGAGTTTGATAACTCAAAAAAACTCGAAACGAAATCGGAGTTTTCTGACTACGAATTAAACTGGCTACTCGATCCGACAGAGTCTTACATAAAAGATCTTCTAGTTGCCTCCGGACTTTACTTTGGATCATGGGACAAATACCTACTAAGAGTAAGAGAGGACACATTGACAAATCCTATAGAGAACTCAATTTTTGAAGAAGTGGAAGAATCTCGGGTCAAAGAAAACATTGATAACAAGTTAGATCACAAAATCTTACTTGATTTGCTAAATGAGGCACTTTCCATTGTTCTTGGACAACCTTTGACAATGTCTAGATTCAGAAGGAATCTCAACAATTTATGCATAATACAGAAGATTCCACCATGTGGGAAAGAACTATTGAAGTTAGTATGGGACATTATCCATGTTTCTTTGTGTCCTCCAAAATCTAACACATGTTCTTGTTCATTTATTAGTTTGGTGAAACAAGATTTTGGATCCATATCATTGTATGGACTAATGAATGATGAGATCAATGTGTTAGAAATGGAGATGGCATGTTTGATTAGTGATGATTTGGTTGAAGAACTCATAAAGGATATGATAGATAATTTCTTTCAAATGTAA 1971 0.3653 MARKVHTHKRHNEGMSSNPQHSIKLQEEAKSHNSTKGSKNYGNSNVTQELSKQSCNRGNNVPSIVARLMGLDIMPVQHHQNMDIDDDGLGKEFTNPMLLRSHPQEEELKKFKREFEAYQASRLKEDPKFNERTKSVQEIMVPCNASLKTKTIKKSRSRFDGMSLSPTQITVLKPCCNHEKEESLKTSTSIEDFLEQVKVRLLSEIQGRKSTFEKSSSVRGSENERHRSSEVTNLLHSQSARSYTSEIELKGQSSPEFISRGTRRLERLRNFVNSENLNDDAMMILERSFSAPLSGKYCRIPIGDHIWEKLDEDLERMLPFDANKKKQKKDRFGIKEKVSNLKQKFGLRGKVFAKRIHSMVETQNSNEDGFMVRDIRSGPTVLMKHWRSHDNFTEVPPSPASFCSSVNEELWCQNEFLSPISTPGLSSVDDSIMPQVYGYISYDLNELSKQLSQLEFDNSKKLETKSEFSDYELNWLLDPTESYIKDLLVASGLYFGSWDKYLLRVREDTLTNPIENSIFEEVEESRVKENIDNKLDHKILLDLLNEALSIVLGQPLTMSRFRRNLNNLCIIQKIPPCGKELLKLVWDIIHVSLCPPKSNTCSCSFISLVKQDFGSISLYGLMNDEINVLEMEMACLISDDLVEELIKDMIDNFFQM 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc507g00001 656 MobiDBLite consensus disorder prediction 35 58 - -
Stsc507g00001 656 Pfam DUF761-associated sequence motif 62 79 IPR032795 -
Stsc507g00001 656 MobiDBLite consensus disorder prediction 1 58 - -
Stsc507g00001 656 Pfam Domain of unknown function (DUF4378) 482 644 IPR025486 -
Stsc507g00001 656 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 144 276 - -
Stsc507g00001 656 MobiDBLite consensus disorder prediction 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc507g00001 Stsc-Chr507 664 3339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc507g00001 46 649 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 33.612 2.29e-83 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc507g00001 - - aip:107621743 837.025