Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc506g00004 ATGGACATTGCAGTCCGAGCTCATCTCAATGGATGGAAGTTTATCTTCCTAAATGATGTTAAGGTACTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGTTGGCATTCAGGTCCTATGCAACTTTTTAGATTGTGCCTCCCTGCAATTGTGAGATCTAAGATATCAATGTGGAAGAAAGCAAACTTAATACTCCTCTTTTTTCTTTTAAGGAAACTAATTCTTCCCTTTTATTCCTTCACCCTGTTCTGTATAATTCTTCCTTTAACCATGTTCGTTCCTGAGGCTGAGCTTCCGTTATGGGTGATTTGCTATGTGCCGGTTTTCATGTCATTCCTTAACATCCTCCCTGCCCCAAAATCTTTTCCTTTCATTGTTCCTTACCTTCTCTTTGAAAACACCATGTCAGTTACCAAATTCAATGCAATGGTATCTGGGCTCTTCCAATTAGGGAGCTCTTATGAATGGGTTGTGACAAAGAAGGCTGGAAGGTCATCTGATTCTGATTTGTTGCCTGCCGAAGAAAGGCGAGTCAAGTCAATAGAGCATCAAAAGATCCACAAAGGAACTTCTGAGAGTGAACTTGTTGAGTTACATCACTTTAAGGAACAAAATGAAGCTGCTCCAAAGCCTATAAAAAAAGCTAATAAGATATACAAGAAAGAGTTGACGTTGGCATTCCTCCTCCTCACTGCTTCTGTACGGAGTCTATTATCGGCACAAGGCGTTCACTTCTACTTTCTACTTTTCCAAGGGGTGACTTTCCTCCTTGTTGGTCTCGACTTGATCGGAGAGCAAATGAGCTAG 822 0.4112 MDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKISMWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSDSDLLPAEERRVKSIEHQKIHKGTSESELVELHHFKEQNEAAPKPIKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc506g00004 273 Pfam Glycosyl transferase family group 2 1 108 IPR001173 -
Stsc506g00004 273 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 89 IPR029044 -
Stsc506g00004 273 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc506g00004 Stsc-Chr506 28296 31420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc506g00004 1 273 REM Transcription Factor Family AT2G24630 80.586 4.01e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc506g00004 - - gmx:100776577 481.1