Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc4g00052 ATGAAAACCAGATTTCAATTCCTGGTGCATCAAGCATTGAACATTATATACTCACACAATGTTTGCAGCTATTTGCACTCCACCTCTCCTCCTGTAGCTCATGGCAACTTGAAGTCTGCCAATATTCTACTAGATGAAAACCTAGTGCCTCATATTTGTGACTGCGGCTTGACTATTTTGAGACCTCTGACAAGCAACAAGGTCAAAGCTCGAGCTACGGAGATTGCTATCAGAGAAGCAGGCTACAAATCACCAAACCATGGTAAACCAGGAACTAACAGCAGCACCGAAAGTGACATCTTTGCATATGGGGTGTTGCTTTTGGAACTGTTAACTGGAAGGGAACCTTTCGATGGTTCCAGGCCTAAGGAAGAGCAATATCTAGCGCAATGGGCTTCATCCAGGCTACATGACAGCAAGACCTTAGAACAGATGGTGGATCCTGCAATTCAAAAGACATTTTCATCCAAGGCTCTATCTCGTTATGCTGATATACTCTCCCTCTGCCTACAGCCTGTAAAGGAATTTCGGCCACCAATGTCTGAAATAGCAGAATCTATTGCTTCTTTCATGCAACGGCTCAACGTGACACATGATCCTGCAGCAGATGGGAATGGACCAATGTCTGATCCACTCGAGAGGTCTTTCCGCACAACTACAACCCAATTTGTTGCTTCCCCCACATTGAGCTACGTATCTGCCTGA 705 0.4511 MKTRFQFLVHQALNIIYSHNVCSYLHSTSPPVAHGNLKSANILLDENLVPHICDCGLTILRPLTSNKVKARATEIAIREAGYKSPNHGKPGTNSSTESDIFAYGVLLLELLTGREPFDGSRPKEEQYLAQWASSRLHDSKTLEQMVDPAIQKTFSSKALSRYADILSLCLQPVKEFRPPMSEIAESIASFMQRLNVTHDPAADGNGPMSDPLERSFRTTTTQFVASPTLSYVSA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc4g00052 234 Gene3D Transferase(Phosphotransferase) domain 1 4 204 - -
Stsc4g00052 234 PANTHER OS01G0253100 PROTEIN 23 190 - -
Stsc4g00052 234 Pfam Protein kinase domain 23 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc4g00052 234 SUPERFAMILY Protein kinase-like (PK-like) 23 187 IPR011009 -
Stsc4g00052 234 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc4g00052 Stsc-Chr4 384048 385189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc4g00052 24 234 Strubbelig Receptor Gene Family AT5G06820 57.075 1.01e-70 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc4g00052 Pkinase 8.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc4g00052 - - gmx:100816202 302.753