Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc4g00044 ATGGAGGATGCAATTTTCTACAGACACATTGTCCCAAGATGGTTGTGGAAGCTTCAGAAATGGCTCCAAATTGGATCAGAGAAGAGCTACAGTGAATCCCAACATATTATTGATAAATTCTTGCATGAATGTGTATCATCAAGACTTGATGATGAAAGAATGAAAAGCATGTTCAACAACGATGAAGAATCAAACTTTGACTTGCTCAATGCTCTTGTCAAGGAAAATGGTGATGAAATGAATCAAATTGATTATAAATTTCTAAGAGACACTGCTATTAGTCTGTTAGGAGCAGGAAGAAGTACAATTAGTGCTGCTCTCTGTTGGTTTTTCTGGCTTGTTTCAACTCACCCTCTTGTTGAAGCCAAGATCCTTGAAGAAATCGAACAGAACTTTACAACCAAAGAAAAAAATTGGGTCACTTTAGGAGTGAATGATAATCTTAAGAAACTAGTTTATCTTCATGGAGCAATATGTGAAGCATTGAGACTTTTTCCTCCGGTGCCGTTCGAGCACAAATGCGCCGTTGAATCAGATATACTTCCGAGTGGTGTTCGTGTTAGTCCGAACACCATGGTCTATTTCTCTCTGTACTCAATGGGAAGGATGGAAAAAATTTGGGGAAAAGATTACTTGGAGTTTAAGCCAGAAAGGTGGATTTCGGAAAAGGGGAGCAACATATACGCACCGTCTTACAAGTTCATAACTTTCAATGCTGGTCCTAGAAGTTGTTTAGGGAGAAATATAAGCTTTATTCAAATGAAGATAATTGCAGTTGCTCTGCTTTCAAACTTTCATATGCAAGTGGTGGAAGGCCATCTTGTGTGTCCAAGTCTTTCTATTGTTCTTCACATGAAACATGGCTTGAAGGTCACAGTTTCTAAAAGAGGCAATTGA 897 0.3846 MEDAIFYRHIVPRWLWKLQKWLQIGSEKSYSESQHIIDKFLHECVSSRLDDERMKSMFNNDEESNFDLLNALVKENGDEMNQIDYKFLRDTAISLLGAGRSTISAALCWFFWLVSTHPLVEAKILEEIEQNFTTKEKNWVTLGVNDNLKKLVYLHGAICEALRLFPPVPFEHKCAVESDILPSGVRVSPNTMVYFSLYSMGRMEKIWGKDYLEFKPERWISEKGSNIYAPSYKFITFNAGPRSCLGRNISFIQMKIIAVALLSNFHMQVVEGHLVCPSLSIVLHMKHGLKVTVSKRGN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc4g00044 298 PANTHER CYTOCHROME P450 2 291 - -
Stsc4g00044 298 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 237 246 IPR017972 GO:0005506|GO:0016705
Stsc4g00044 298 PRINTS P450 superfamily signature 98 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS P450 superfamily signature 235 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS P450 superfamily signature 244 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS P450 superfamily signature 156 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 Gene3D Cytochrome P450 1 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 SUPERFAMILY Cytochrome P450 4 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS E-class P450 group I signature 244 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS E-class P450 group I signature 107 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS E-class P450 group I signature 87 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 PRINTS E-class P450 group I signature 234 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc4g00044 298 Pfam Cytochrome P450 21 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc4g00044 Stsc-Chr4 332106 333002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc4g00044 2 298 Cytochrome P450 AT2G23180 46.382 1.01e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc4g00044 - - ahf:112735737 441.81