Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc4g00019 ATGGCCTCCTCACCCTCACCCACACCCACACCCTCATCTCCAAAACTAATTGCCCCAATTACCACCATCATCGCTACCACTACCACAACGACAACAACAAACACCACAAACGACGTCGTTTCACCAACCAAGAAACCCCAACCGATCCCATGGACTCACCAGGAGACCATTAACCTAATCAGGGCGTACCAGGAGAAGTGGTACGCCTTGAAGCGGGGCCCACTCCGTGCCAGCCAGTGGGAAGAGGTCGCCGTCGTCGTCGCCGCCCGCTGCGGCTATGACTTCAACCATCCTTCCAAGTCCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGAGCCGAGAAGAAGCAACGCCTTCTCACCACCTCCCGCGTCCCAGCACGTGCCACGTGGCAGTACTACGGCCTCATGGATGAGCTGGAGCGCGGCCCCATGCCTATCTCGGCCCGGCCCGTAACCTCCATGGCGCCAACCAGCGGCAACGACGACGACGGTAACTACGGAAGTTTCTATCAAAATGACGATGATTTCGTTGACCCTAATGAAGACAGGGAGAATTATATAAAATCAAAGAGTATTAATTATCTTCTTAGCAAGAAACCCTCAATGAACAAGTGTAGAGGGGTTTTGAGGGACCATATTCTTCCAAAAGGATTCTGGAGCGTTGATGATGGTGACTATGATGATGATGATGATGTTAATTATCTTGATGATGATGATTATGGTGGCGGTGGTGATGATCAGAAAGGATTGTTAATGGTGGATGAGAGGGCTTTGGTTTCAGGTTTGAGTACAGAGATAAAGGATTTCACTGAGAGGTTCATTGGGATGGAGAATTTGAAGATGAGGATCATGAAGGAAACTGAGAGGAGGAGGTTGGAGATGGAGAACAGGCGGATGGAGATGATCCTCGAGTCGCGGCAGCGGACCATCGATTCCATCAGCCGGGCGTTCGGGTCATCCAAGAGGCTGAAGATGAGTGAAGGAAGCTGA 1008 0.5208 MASSPSPTPTPSSPKLIAPITTIIATTTTTTTTNTTNDVVSPTKKPQPIPWTHQETINLIRAYQEKWYALKRGPLRASQWEEVAVVVAARCGYDFNHPSKSAVQCRHKMEKLRQRHRAEKKQRLLTTSRVPARATWQYYGLMDELERGPMPISARPVTSMAPTSGNDDDGNYGSFYQNDDDFVDPNEDRENYIKSKSINYLLSKKPSMNKCRGVLRDHILPKGFWSVDDGDYDDDDDVNYLDDDDYGGGGDDQKGLLMVDERALVSGLSTEIKDFTERFIGMENLKMRIMKETERRRLEMENRRMEMILESRQRTIDSISRAFGSSKRLKMSEGS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc4g00019 335 Coils Coil 290 310 - -
Stsc4g00019 335 Gene3D - 51 118 - -
Stsc4g00019 335 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 320 IPR044823 -
Stsc4g00019 335 Coils Coil 102 122 - -
Stsc4g00019 335 ProSiteProfiles Myb-like domain profile. 50 113 IPR001005 -
Stsc4g00019 335 FunFam Trihelix transcription factor ASIL2 51 118 - -
Stsc4g00019 335 Pfam Myb/SANT-like DNA-binding domain 50 145 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc4g00019 Stsc-Chr4 165775 167382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc4g00019 51 145 Trihelix Transcription Factor Family AT3G14180 27.368 6.22e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc4g00019 Myb_DNA-bind_4 9.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc4g00019 - - adu:107474774 513.072