Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc4g00006 ATGGCTGAGAATTTTTTACAACCAGGACCAGTAGAAAAAAAGACTCCAGAAGAAGTTGGTGATGAATATTTTGATGAATTAGTTGCAAGATCATTTTTCCAACCTCGTACTACCCAATTTGGTGAAAAGATATTTGTGATGCATGATCTCGTGCATGATTTGGCAATGATCTTTGCTAAAGAATTCTGTTCCAGGGCGGAAGAGCATGAGAAAGCTGTTGAGATAGGTACCAGAACTCGTCATTTGTCACATCTTGCAAAAGAAGATTATCCGATCTCAAAACTTTTGGAAGGGATTGATTCATCTGCGTTATTTGAATTGTCTTTGACCGAAATCGTAACGTTGCCTGAGTCACTGGGTAGCCTATACAATTTGCAGACCTTGAAGCTATCTAGTTGTTACAGTTTGAAAATGCTTCCGGGTAGCATGCAAGATCTTGTAAATTTACGTCATCTTGATATTAGTTACACTCCGTTGAATGAGATGCCGATGGGCATGAGCAAGTTGAAAAGTTTGCAGTTTTTAAGCAACTATGTTGTTGGGAAGCATGAGGGGAACAAGATGAGAGAATTGGGAGCACTTGCAAATCTACAGAAATCAATTTGCATTTCCCATTTGGAGAATGTGGTCAACAGTAATGAAGCTTCGGAGGCAAGAATGTGTGATAAAGATGGCATTGACGTTTTGAAGTTGTGTTGGTCTCGGACCGAGGATGAGAATATGGTTGATTTCCAAATTGAAAAAGATATATTGGACAAGTTACGGCCACACAGTAATTTGAAAGAGCTTGAAATCTTGGGCTACAGGGGTACAAAATTTCCGGATTGGTTGGGACATTTTTCCTACCACAACATCACCAAAGTAACACTGGGCATTCTATTTGACCTTGGTTTTAGGAATTGTTATATGCTTCCTTCACTTGGACAGTTGCCCTCTTTGAAGCACCTATCAATTTCAAGTTTTTTAAGATTGGAGATTGTAGGTGCTGAGTTTTACAGAGACGATGAATCTTTTTTAGAAACTCCATTTCCAATGCTAGAGACTCTTTCGTTTGAGTCAATGCCTTGCTGGAAGGAGTGGTGTTCGTTGGAGTGGAATGCATTTCCTTGA 1110 0.3955 MAENFLQPGPVEKKTPEEVGDEYFDELVARSFFQPRTTQFGEKIFVMHDLVHDLAMIFAKEFCSRAEEHEKAVEIGTRTRHLSHLAKEDYPISKLLEGIDSSALFELSLTEIVTLPESLGSLYNLQTLKLSSCYSLKMLPGSMQDLVNLRHLDISYTPLNEMPMGMSKLKSLQFLSNYVVGKHEGNKMRELGALANLQKSICISHLENVVNSNEASEARMCDKDGIDVLKLCWSRTEDENMVDFQIEKDILDKLRPHSNLKELEILGYRGTKFPDWLGHFSYHNITKVTLGILFDLGFRNCYMLPSLGQLPSLKHLSISSFLRLEIVGAEFYRDDESFLETPFPMLETLSFESMPCWKEWCSLEWNAFP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc4g00006 369 Gene3D Ribonuclease Inhibitor 65 365 IPR032675 -
Stsc4g00006 369 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 106 362 - -
Stsc4g00006 369 SUPERFAMILY L domain-like 46 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc4g00006 Stsc-Chr4 39465 40743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc4g00006 115 175 WRKY Transcription Factor Family AT4G12020 42.623 8.58e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc4g00006 - - ahf:112728742 446.432