Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc495g00002 ATGGAGGAGACTGAGGCTTGTGCAAAAGACAGCCCGCTCGTTCTGTTGAAGCAAGGTGCTGAAGCTAGGGTTTTTGAGTCCAATTTTGTGGGGAGGAGATCTGTTATCAAAGAACGCTTCTCAAAGAAGTATAGGCATCCAACTTTGGACTCTAAGCTTACGCTTAGGCGCTTAAATGCTGAAGCTAGGTGCGTGGCCAAAGCAAGAAAGCTTGGGGTTTGTACCCCTTCACTCTATGCCGTGGATACTGTGCTGAATACTTTAACTTTTGAGTATGTTGAGGGTCCTTCCCTCAAAGAAGTACTTCTTGAATTTGGGTTGAAAGGTGTTGTTGAAGAGCGGCTTGATGATATTGCTTCCCAAGTTGGTGATGCGATTGGTAAATTGCATGATGGTGGCCTAATTCACGGTGACTTAACAACATCAAATATGTTGCTAAAGAGTGGTACCAATCAATTGATGGATCGGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAATAAACTTGCTCAAGGTATCAATGGACGAGGTAGTGTTGCACCAGTGCCGCAGGAGATGGGCGAGGCACTGATGGTTGATGGGTGCAAGCCCAGTCACGCACCGGTTGGGCACGGCACTCGACAAGTGCATGTGCCGTGGGGGGGCGTCATTGGTTCGGGCAGAGTGACGTGGCTGAGGGGCACGGCATTGGGCCGAGGGGTGGTGACGCCACATGTCCCCGCATGA 744 0.4973 MEETEACAKDSPLVLLKQGAEARVFESNFVGRRSVIKERFSKKYRHPTLDSKLTLRRLNAEARCVAKARKLGVCTPSLYAVDTVLNTLTFEYVEGPSLKEVLLEFGLKGVVEERLDDIASQVGDAIGKLHDGGLIHGDLTTSNMLLKSGTNQLMDRILAAYRKSSKQWSSTLNKLAQGINGRGSVAPVPQEMGEALMVDGCKPSHAPVGHGTRQVHVPWGGVIGSGRVTWLRGTALGRGVVTPHVPA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc495g00002 247 NCBIfam KEOPS complex kinase/ATPase Bud32 19 180 IPR022495 GO:0004674
Stsc495g00002 247 Gene3D Transferase(Phosphotransferase) domain 1 106 152 - -
Stsc495g00002 247 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 149 184 IPR022495 GO:0004674
Stsc495g00002 247 Pfam Protein tyrosine and serine/threonine kinase 58 157 IPR001245 GO:0004672|GO:0006468
Stsc495g00002 247 Gene3D Phosphorylase Kinase; domain 1 21 93 - -
Stsc495g00002 247 FunFam TP53-regulating kinase isoform X1 21 93 - -
Stsc495g00002 247 ProSiteProfiles Protein kinase domain profile. 10 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc495g00002 247 ProSitePatterns Tyrosine protein kinases specific active-site signature. 134 146 IPR008266 GO:0004672|GO:0006468
Stsc495g00002 247 SUPERFAMILY Protein kinase-like (PK-like) 15 155 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc495g00002 Stsc-Chr495 11211 22754 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Stsc495g00002 PK_Tyr_Ser-Thr 2.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc495g00002 K08851 - jre:109018511 279.641