Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc48g00016 ATGTTTCTACACTTGGGACACACTCCAACCCTAGTGGTTTCATCAGCCAAGATGCTTAAAGAAATTATGAAAAATCACGAGTTAGCATTCTTGGATCGATTCAAAACCACAGCCGTGAGAATCTTGATGTATGGATGCAACGACATTGCTTTCGCAAACTATGGACAAAATTACACGCAAATGAAAAGAATATTTGTCCTTGAACTCTTTGGCCCTAAATTGATGCAATCACTTCGCTTGATTAGGGAAGAAGAAGTCACCAAATTGGTAAAAAATTTACGTGAATTAGCAGCAAGAAATACTAGCGATGTGAACCTAAGTGAGATGATTCTTGATACGTTAAATAGTATCATTTGTAAGAGTTCACTTGGATGTAATACACAAGATTATGATTATGAAAGTGCAAAAGGGATAGCAAGAAAAGTGACGACCCAACTTGAGGGATGGCAAAAATCTCCATATCTACGGGCACTCGCTTTAATTTCCCGCGAAATTCCCACCGGGACGGTGACCCTCCCCCCACGAATAAATGGGGACGAGGACGAGCATAGAAGTACTCGCTCCATTTGA 570 0.4053 MFLHLGHTPTLVVSSAKMLKEIMKNHELAFLDRFKTTAVRILMYGCNDIAFANYGQNYTQMKRIFVLELFGPKLMQSLRLIREEEVTKLVKNLRELAARNTSDVNLSEMILDTLNSIICKSSLGCNTQDYDYESAKGIARKVTTQLEGWQKSPYLRALALISREIPTGTVTLPPRINGDEDEHRSTRSI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc48g00016 189 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 158 - -
Stsc48g00016 189 SUPERFAMILY Cytochrome P450 2 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00016 189 Pfam Cytochrome P450 3 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00016 189 Gene3D Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc48g00016 Stsc-Chr48 112334 113371 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc48g00016 1 163 Cytochrome P450 AT1G11610 37.349 5.13e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc48g00016 K20617 - gmx:100803922 142.51