Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc48g00015 ATGGAGTACTTAAAATATGTGGTGAAAGAAACAACTAGATTGCATTCACCAGCACCTTTCTTTATTCCTAGAGAAACATCAACTAATGTGAAATTGGAAGGTTACGACATTCCTGCAAAAACAATGGTATGTGTGAATGCATGGGCTATACAAAGAGACCCAGAATATTGGGAAAGGGCAGAAGAGTTCATTCCAGAGAGGCATGAAAAGATGAAAGTTCGTTACAATGGTCAAGACTCCCAATTTGCACCATTTGGTTTTTGGAGAAGAGGATGTCCTGGAATGAGTTATGGAATTGAGTCTGCTGAGTATTTGCTTGCTAACCTTCTTTGTTAA 336 0.3869 MEYLKYVVKETTRLHSPAPFFIPRETSTNVKLEGYDIPAKTMVCVNAWAIQRDPEYWERAEEFIPERHEKMKVRYNGQDSQFAPFGFWRRGCPGMSYGIESAEYLLANLLC 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc48g00015 111 Pfam Cytochrome P450 1 110 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00015 111 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00015 111 PRINTS E-class P450 group I signature 82 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00015 111 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00015 111 PRINTS E-class P450 group I signature 46 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00015 111 PANTHER CYTOCHROME P450 71B11-RELATED 1 110 - -
Stsc48g00015 111 Gene3D Cytochrome P450 1 111 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc48g00015 111 SUPERFAMILY Cytochrome P450 1 110 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc48g00015 Stsc-Chr48 110920 111352 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc48g00015 1 110 Cytochrome P450 AT3G26270 51.818 1.50e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc48g00015 K20617 - gmx:100785621 170.244