Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc485g00003 ATGGCTGATTCATCAAACAACAACGACCAGAAGAGCCAGAACACGCGCGTCTACCACCCTTACCAGGACCTCAACGTCCCAATCCAGAAGCTCTACAACCTCCCAACCTCGCCGGAGAATCTCTTCCCCGAACTCGGCAATAGAACCCACCGCTCTTGGAGCGAGAACCTCACCTACTACACCGGCGTCGCCTACCTCTCCGGCGCCGTCGCCGGCGCTACAACCGGCACTGTTGAGGGCCTCAGGGCCGCTGAGCAAGGTGACTCGTTCAAGATCCGAGTCAACCGAATCCTCAACTCGGGGGGTCAGAGAGGGCGCAGGCTCGGAAACTCGCTCGGAACGTTGGGCTTGATCTTCTCCGTCACGGAGAGTGCGATTCAATCGTTCACCGATAGGGATGACATGGTTAACAGCGCCGCCGCTGGGCTTGTCACTGGAGCTTTGTATAAGGCGGCGGCGGGGCCAAGATCGGCGGTGATTGCGGGAGTCTTCGGTGGGATCGCGGCGGCGGCCACCGTGGCCGGGAAGCAGGCTCTGAGGAGATATATTCCGATATAG 558 0.5986 MADSSNNNDQKSQNTRVYHPYQDLNVPIQKLYNLPTSPENLFPELGNRTHRSWSENLTYYTGVAYLSGAVAGATTGTVEGLRAAEQGDSFKIRVNRILNSGGQRGRRLGNSLGTLGLIFSVTESAIQSFTDRDDMVNSAAAGLVTGALYKAAAGPRSAVIAGVFGGIAAAATVAGKQALRRYIPI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc485g00003 185 PANTHER TIM23 27 172 IPR045238 GO:0022857
Stsc485g00003 185 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc485g00003 Stsc-Chr485 6105 7049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc485g00003 1 181 Chloroplast and Mitochondria Gene Families AT1G17530 53.552 9.29e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc485g00003 K17794 - gmx:100803835 241.121