Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc483g00004 ATGTTGATTGCATCTAAATATGAAGAAATCTGGGCTCCTGAGGTTAATGACTTTGTTCTCATATCAGACAATGCCTATATTAGAGAACAGGTTCTGGTGATGGAGAAAACAATCTTGAGAAAGCTTGAATGGTACCTAACCGTTCCCACACCCTATGTGTTCCTGGTTCGGTATATCAAAGCCTCCACCCCTTCTGATGATGAGATGGAGAATATGGTGTTCTTCCTTGCTGAACTTAGTTTGTTGCACTATCCTACTATCATCTCCTATTGCCCTTCTGTGATTGCTGCTTCTGCTGTGTATGCTGCAAGATGTACCCTTGAAAGGGTTCCTTCTTGGACTGAAACTCTTGAACACTACACAGGCTACTCTGAGGAACACATAAGGGATTGTGCAAAACTCATGGCAAGCTTTCATGTTGCTGCTCCAGAAAGCAAGCTTAGGGCAGTTTACAAGAAATTCAGCAGCATGGATCGCAGTGCTGTTGCTCTTCGTACCCCAGCAAAGAACTTGCTAACACAATCTTGA 528 0.4337 MLIASKYEEIWAPEVNDFVLISDNAYIREQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDDEMENMVFFLAELSLLHYPTIISYCPSVIAASAVYAARCTLERVPSWTETLEHYTGYSEEHIRDCAKLMASFHVAAPESKLRAVYKKFSSMDRSAVALRTPAKNLLTQS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc483g00004 175 SUPERFAMILY Cyclin-like 1 47 IPR036915 -
Stsc483g00004 175 SMART cyclin_7 53 137 IPR013763 -
Stsc483g00004 175 SUPERFAMILY Cyclin-like 50 170 IPR036915 -
Stsc483g00004 175 FunFam G2/mitotic-specific cyclin-1 37 163 - -
Stsc483g00004 175 Pfam Cyclin, N-terminal domain 1 46 IPR006671 -
Stsc483g00004 175 Gene3D - 41 175 - -
Stsc483g00004 175 SMART Cyclin_C_2 49 168 IPR004367 -
Stsc483g00004 175 Pfam Cyclin, C-terminal domain 49 164 IPR004367 -
Stsc483g00004 175 PANTHER CYCLINS 1 155 IPR039361 -
Stsc483g00004 175 Gene3D - 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc483g00004 Stsc-Chr483 27647 28643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc483g00004 1 164 Core Cell Cycle Gene Families AT2G26760 62.805 1.24e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc483g00004 K21777 - gmx:547782 281.567