Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc483g00003 ATGGAACACAAAAAAATAAGAGGAAGAACTTCATCATGTGTTGTTCTTATCCTCATCATCATCATCACAGTTTGTTCTTCTTCAGGATCCTTTGTTGATGCTTACAAGAATTACACAGTTGGAGATTCTTTAGGATGGATTGATAGCACCATGAATTCTGATATCAATTACCAGAAATGGGCTTCCAATAAAGTTTTCAGCTTGGGTGATTTCCTAATTTTCAACACAGACACCAACCATTCTGTTGTCCAAACATACAATGCAACAACGTACAAACAATGTGACTATGATGATGCACAAGACAAAGATACATTCCAATGGCTACAATCAAACCCATCAAACACAGAAACACATTCAACGACGGTTTCAGTTCCATTAAAGAAGGAAGGTGTCACATACTTCTTCTCTAGTGACTATGATGGTGATCAATGCAAAAGTGGACAAAGGTTCCAAATTAATGTCACTCATGGACAAGGTTTACCTAAGAGCCTTAAGGATCCTTCAGAGGATTCTGCTCCTTCTCCTTCTGGTGCCGCTGGTGGTGGTGTTGCTGGCGATGATGATGCAGCACCGGATACTATTGTTCCTGCAAATTTTAATCACCCCAAGTATGAAAATAGTGATAGTAGCGATGATGATGAAAATGATACGGCTAGTGGGAAAGGAAAAGCTAGTTCTGATTCTGTGTCGATTTATGAACAAGTACGCCTAAAATTATTCGGATCTCTTGCTTTATTAGGGGTTGTTTTCTTGATATAA 759 0.3874 MEHKKIRGRTSSCVVLILIIIITVCSSSGSFVDAYKNYTVGDSLGWIDSTMNSDINYQKWASNKVFSLGDFLIFNTDTNHSVVQTYNATTYKQCDYDDAQDKDTFQWLQSNPSNTETHSTTVSVPLKKEGVTYFFSSDYDGDQCKSGQRFQINVTHGQGLPKSLKDPSEDSAPSPSGAAGGGVAGDDDAAPDTIVPANFNHPKYENSDSSDDDENDTASGKGKASSDSVSIYEQVRLKLFGSLALLGVVFLI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc483g00003 252 MobiDBLite consensus disorder prediction 157 227 - -
Stsc483g00003 252 PANTHER BLUE COPPER PROTEIN 36 178 IPR039391 GO:0009055
Stsc483g00003 252 CDD Phytocyanin 36 154 - -
Stsc483g00003 252 FunFam Early nodulin-like protein 18 35 157 - -
Stsc483g00003 252 SUPERFAMILY Cupredoxins 36 155 IPR008972 -
Stsc483g00003 252 ProSiteProfiles Phytocyanin domain profile. 36 156 IPR003245 GO:0009055
Stsc483g00003 252 Pfam Plastocyanin-like domain 51 148 IPR003245 GO:0009055
Stsc483g00003 252 Gene3D - 34 157 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc483g00003 Stsc-Chr483 7578 10150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc483g00003 11 214 Phytocyanin Superfamily AT1G08500 57.843 4.16e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc483g00003 - - ahf:112702128 390.193