Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc48320g00001 ATGAAGGATAAAGAAAAGGACAAGGAAAAAGAGGCGGAGAAGAAGAAGTACCCTATCGGTGCCGAGCATTACGATCTCTACGAGGAGATTGGACACGGTGTCAGTGCCGCCGTCCACCGTGCGCTCTGCATCCCCCTCAACGAGGTCATCGCCATCAAGATCCTCGACTTCGAACGCGACAACTGCGATCTG 192 0.5365 MKDKEKDKEKEAEKKKYPIGAEHYDLYEEIGHGVSAAVHRALCIPLNEVIAIKILDFERDNCDL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc48320g00001 64 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Stsc48320g00001 64 Gene3D Phosphorylase Kinase; domain 1 12 64 - -
Stsc48320g00001 64 SUPERFAMILY Protein kinase-like (PK-like) 15 58 IPR011009 -
Stsc48320g00001 64 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 64 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc48320g00001 Stsc-Chr48320 9 200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc48320g00001 13 64 MAP Kinase Kinase Kinase Kinase AT1G79640 84.615 1.28e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc48320g00001 K08835 - ccaj:109808241 102.064