Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc47g00019 ATGGGTTCCTGCTTCTCCTTGGAAAGCAGGAGCCCCAATTCACCATCTTCAGGATTCAGTAGGAAGAGGAAGAATTCCAAGAAGAGGATTGGGTCTAGAAGCTCTTCATTTGAGTATTGGAGGAATGAGCCTCTCCATAGGGTCCCTGGTAGGATGTTCCTCAATGGTTCTACCCAATTTGCTTCCTTGTTCACCCAGCAAGGAAAGAAAGGCACCAATCAAGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGACAAGATACTGTTTTCTGCGGTGTTTTCGATGGCCATGGTCCATTTGGTCACATGGTTGCGAAAAAAGTGAGGGATGTTCTCCCCCTAAAACTGAATGCTCATTGGGAAGCTAATATATCTGGCGACGATGTCCTCAAGGGGATTAGTGTGAATACCACGGTGAGCATGAACTCTGAAGAGGCCTCCTCGTTTGTATCCGCCGACGAGGAATCCAGAGCATCCATTGATGTTGAAGAATTGGAAAAATACCCTGAAATCTTTCAAACTCTTAGAGAGTCTTTTCTGAAGGCCTTCAAAGTTATGGATAGAGAATTGAAGACACACCCTAGTGTTGATTGCTTCTGCAGTGGAACAACAGCAGTGACATTGGTGAAACAGGGCCACGATCTTATTGTTGGAAATGTTGGTGATTCTAGAGCTGTGCTTGGTACAAGAGAGAATGACAATTCTCTTGTTGCAGTTCAGTTAACTGTGGATCTAAAACCGAATCTTCCAGCCGAAGCCGAGAGAATTCGTAGATGTAAAGGCCGTGTTTTCGCCCTTCATGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAATAATGATTCCCCCGGCCTTGCCATGGCTCGAGCATTCGGGGATTTTTGTCTTAAAGATTTTGGTTTGATATCTGTTCCGGAGGTTTCATACCGAAGACTCACCGAGAAGGATGAGTTTATCGTCTTAGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTAGACATAGTAGCAGCTGCACCATTGCGGTCCACAGCGGCTCGAGCTCTGGTCGAGTCTGCTGTTAGAGCTTGGAGATACAAATATCCAACTTCCAAGGTAGATGACTGTGCAGTGGTTTGCCTCTTTCTGGACCAGGACTTGCATAAAATATCCCACACTTCCTATGCTAAGTCCAAAGAGCAGCAGAGTTCAGGGATCGAAGCAAACGGTGACAGCGAAGAGGTGGAAGGCATTCCGGAACCTACTGGTCTGGTAAGGTCGGGAACTTGCAGGGAAGTCAATAATGACACATCCAATGGTGAAAGCAACGATGAAATGCTCAAAGATGATGTGATGGATGCTGGAGATTGGTCTGCACTTCAAGGAGTGACTAGAGTGAACACATTGTTGAATCTACCGAGATATGACCCTCGCAAAGATAAGGGTGTGGCTGCCAGCCCGAAGAAGTGCAAATGA 1467 0.4608 MGSCFSLESRSPNSPSSGFSRKRKNSKKRIGSRSSSFEYWRNEPLHRVPGRMFLNGSTQFASLFTQQGKKGTNQDAMVVWENFCSRQDTVFCGVFDGHGPFGHMVAKKVRDVLPLKLNAHWEANISGDDVLKGISVNTTVSMNSEEASSFVSADEESRASIDVEELEKYPEIFQTLRESFLKAFKVMDRELKTHPSVDCFCSGTTAVTLVKQGHDLIVGNVGDSRAVLGTRENDNSLVAVQLTVDLKPNLPAEAERIRRCKGRVFALHDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAAAPLRSTAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDQDLHKISHTSYAKSKEQQSSGIEANGDSEEVEGIPEPTGLVRSGTCREVNNDTSNGESNDEMLKDDVMDAGDWSALQGVTRVNTLLNLPRYDPRKDKGVAASPKKCK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc47g00019 488 PANTHER PROTEIN PHOSPHATASE 33 378 IPR015655 GO:0004722|GO:0006470
Stsc47g00019 488 MobiDBLite consensus disorder prediction 1 20 - -
Stsc47g00019 488 SMART PP2C_4 49 378 IPR001932 -
Stsc47g00019 488 Pfam Protein phosphatase 2C 167 358 IPR001932 -
Stsc47g00019 488 CDD PP2Cc 59 380 IPR001932 -
Stsc47g00019 488 Gene3D - 55 383 IPR036457 -
Stsc47g00019 488 MobiDBLite consensus disorder prediction 469 488 - -
Stsc47g00019 488 MobiDBLite consensus disorder prediction 395 447 - -
Stsc47g00019 488 SUPERFAMILY PP2C-like 53 381 IPR036457 -
Stsc47g00019 488 FunFam probable protein phosphatase 2C 33 55 383 - -
Stsc47g00019 488 MobiDBLite consensus disorder prediction 1 30 - -
Stsc47g00019 488 MobiDBLite consensus disorder prediction 471 488 - -
Stsc47g00019 488 ProSiteProfiles PPM-type phosphatase domain profile. 60 380 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc47g00019 Stsc-Chr47 108785 112067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc47g00019 1 476 PP2C-type Phosphatase Gene Family AT3G02750 62.264 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc47g00019 - - gmx:100790373 753.821