Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc477g00007 ATGGCTTCCCGTGAAAATTTCGTCTACATCGCCAAGCTCGCCGAGCAAGCTGAGCGCTACGAAGAAATGGTGGATGCGATGAAGAATGTGGCGAAGCTTAACGTTGAATTAACCGTTGAAGAGAGGAACCTTCTTTCAGTTGGATACAAGAACGTGGTTGGTTCTCGCAGGGCTTCGTGGAGGATCCTTTCCTCCATTGAGCAGAAGGAGGAAGCTAAAGGGAACAATGTCAGTGTTCAGCGCATAAAGGACTACAGGAAGAAAGTGGAATCTGAGTTGTCCAACATTTGCAGTGATATCATGGATGTTATTGATAACCATCTTATTCCCATGGCTTCTGGTGAATCCAGTGTCTTCTTCAACAAAATGAAAGGTGACTATTACCGGTATCTCGCCGAGTTCAAGGCCGGAGATGAGAGAAAAGAGGCTGCTGATCAGTCCATGAAAGCATATCAGGAAGCTTCCACCATAGCAGACACTGAATTGCCTCCTACTCATCCCATCAGACTGGGTTTGGCTTTGAATTTCTCTGTTTTTTACTATGAAATCTTGAACTCACCTGAAAGGGCCTGTCATCTTGCTAAGCAGGCTTTTGATTTAGCAATCTCTGAGTTGGATACTCTGAGCGAGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAATCTCACCTTGTGGACTTCCGACATCCCTGAAGAAGGAGCTGAGGAACAAAAGGGGGAATCTACCCGAGCTCCAGGAGGTGAAGCTGCAGAGTAA 771 0.4617 MASRENFVYIAKLAEQAERYEEMVDAMKNVAKLNVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEEAKGNNVSVQRIKDYRKKVESELSNICSDIMDVIDNHLIPMASGESSVFFNKMKGDYYRYLAEFKAGDERKEAADQSMKAYQEASTIADTELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDLAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEEGAEEQKGESTRAPGGEAAE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc477g00007 256 MobiDBLite consensus disorder prediction 233 256 - -
Stsc477g00007 256 PIRSF 14-3-3 1 245 IPR000308 -
Stsc477g00007 256 FunFam 14-3-3 protein epsilon 1 244 - -
Stsc477g00007 256 ProSitePatterns 14-3-3 proteins signature 2. 213 232 IPR023409 -
Stsc477g00007 256 Gene3D - 1 244 IPR036815 -
Stsc477g00007 256 PRINTS 14-3-3 protein zeta signature 36 65 IPR000308 -
Stsc477g00007 256 PRINTS 14-3-3 protein zeta signature 85 109 IPR000308 -
Stsc477g00007 256 PRINTS 14-3-3 protein zeta signature 115 137 IPR000308 -
Stsc477g00007 256 PRINTS 14-3-3 protein zeta signature 177 203 IPR000308 -
Stsc477g00007 256 PRINTS 14-3-3 protein zeta signature 204 233 IPR000308 -
Stsc477g00007 256 PRINTS 14-3-3 protein zeta signature 150 176 IPR000308 -
Stsc477g00007 256 SMART 1433_4 4 244 IPR023410 -
Stsc477g00007 256 Coils Coil 10 30 - -
Stsc477g00007 256 ProSitePatterns 14-3-3 proteins signature 1. 42 52 IPR023409 -
Stsc477g00007 256 Pfam 14-3-3 protein 11 231 IPR023410 -
Stsc477g00007 256 SUPERFAMILY 14-3-3 protein 1 233 IPR036815 -
Stsc477g00007 256 PANTHER 14-3-3 PROTEIN 4 234 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc477g00007 Stsc-Chr477 29854 32294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc477g00007 4 256 14-3-3 family AT2G42590 78.210 2.12e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc477g00007 K06630 - gmx:100807980 439.499