Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc4775g00001 AATGCTTTGGTTCCTGGATTTGCAAGAGCTACTGTGAAGGAGCTCATGGAATCAGAGGATGGTTATGGTATCAGAAAAGTACAAAAAGGGATTGAAAGGTTGGATGACGAGTATATTAAGTCAGGCATAGATTGGTTAGAATTAAATAAAGGAGTGCCTTGTTGGGAAGATAGTTTCTCATTAGTTTCATGGTTGAGATTGGGACTTGAGGACCAAACTTTTGCATGGGGTCAACTAAAATGTTCTACACCACTTACAGTTAAGCCAGGTCTAATCATTCTATTACCAGGGCCACCAGGTGATGGAG 307 0.4072 NALVPGFARATVKELMESEDGYGIRKVQKGIERLDDEYIKSGIDWLELNKGVPCWEDSFSLVSWLRLGLEDQTFAWGQLKCSTPLTVKPGLIILLPGPPGDG 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc4775g00001 102 Gene3D - 1 102 IPR023213 -
Stsc4775g00001 102 Pfam Transferase family 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc4775g00001 Stsc-Chr4775 21 329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc4775g00001 1 102 Monolignol Biosynthesis Gene Families AT5G48930 25.862 2.54e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc4775g00001 K15400 - gmx:100801822 147.902