Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc471g00003 ATGGGATTTACTCGAGTTCTGTTGAGACCTTGGTTCTACGTTATTGTTGGTGATCATAGGGACACATTATACTTATATCCAAGACCAAGCACCCTTTATCATCATCAGTTCTTGCTATTTCTTATTTTTGTTCTTGTTACCGATACTCAACCATTGCAACCCCAATATTTTCACAACCATTCGCGAGTCACAATATTTCAATTCCTAGGGAGAACGACCCGAGTTCAATACTCGGTATTTTTAATTGGTTGCAAGCTCTGTGACACCTTTCTTGTTGACGAAACCCCGCTGTCAATCTCACAATTGGTTTGGATTCCTCTACAACGATACTATCTTATTTTGAAAATTAAGGAATTCCGAACCGGTCGCGAGAGCGGCCGCGGGGCATCCGTCAGGCTATCTAGCCCAAGATTTCAGCAGAAGATCAGCGACATATTGCTCGATGGCGACGGTGGTTACAGGCCAGACACGCAGTTCGATGGCTCTCAGGTTCATCTCGACCTGAACGAGCCTGTGTCCGGTCCGTCACATGCGTTCATGGCTCTTGGTGGGACTCCTTCATTAGTGGCACACGTGCCAGGTGGATCCTGGGAGGTACCGTTCATGGAGCCTGCCCGTCTGCTGACTCCTCCAGCATCACCCGCACCGGCTGAGCAGCCTGATCAGCCAGCAGCACGTGGGCGGGCCCACAGAGCTCCACGTCACCCACCCTGCGGCACCGGAAGCCATAGGGTGAAGAGTTCTAATCAAACGGTGCATAAAGGACAAGAACGAGATCATGCGATTCATCTAGATGGAGTCCCCATCAAGCTAAATGGTTTGTCTCATGTTGATGAAGAGTATATTCCAAAGGTTGGGATGACTTTTCTAACAATTGAAGAAGCTAATGTTTTCTATAAAGAGTATGCTAAACGAGCAGGCTTTGCTACTAAAATCAGGAATTCGAATAAGAATAAAGATAGCGGTGCAATCAAGAATCAGCTTATCACATGTAATAGAGAGGGGAAAACGAGATCTGATTTACCTGAAGCTGAGAAGACTAATCCAATGTCTCCTGCAAATTGCCCTACAAGAATTTATTATGTGCACATACAGAAGAAGACTCAACTTTTTGTTATTTCAAAGGTTGTTTTGGAGCATTCACATCCATGTTCCACTGATCAAGCTCAAATGTTACCACATCATAGGCAGCTTAGTATGCATGTTCGTCGAGTCATCGAGAACAACCATTAA 1233 0.4542 MGFTRVLLRPWFYVIVGDHRDTLYLYPRPSTLYHHQFLLFLIFVLVTDTQPLQPQYFHNHSRVTIFQFLGRTTRVQYSVFLIGCKLCDTFLVDETPLSISQLVWIPLQRYYLILKIKEFRTGRESGRGASVRLSSPRFQQKISDILLDGDGGYRPDTQFDGSQVHLDLNEPVSGPSHAFMALGGTPSLVAHVPGGSWEVPFMEPARLLTPPASPAPAEQPDQPAARGRAHRAPRHPPCGTGSHRVKSSNQTVHKGQERDHAIHLDGVPIKLNGLSHVDEEYIPKVGMTFLTIEEANVFYKEYAKRAGFATKIRNSNKNKDSGAIKNQLITCNREGKTRSDLPEAEKTNPMSPANCPTRIYYVHIQKKTQLFVISKVVLEHSHPCSTDQAQMLPHHRQLSMHVRRVIENNH 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc471g00003 410 MobiDBLite consensus disorder prediction 206 264 - -
Stsc471g00003 410 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 268 409 - -
Stsc471g00003 410 MobiDBLite consensus disorder prediction 250 264 - -
Stsc471g00003 410 Pfam FAR1 DNA-binding domain 298 385 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc471g00003 Stsc-Chr471 12595 15566 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc471g00003 FAR1 2.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc471g00003 - - adu:110280446 158.688