Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc470g00003 ATGGAGTTTTTCTCTGATTATGGTGATGCCAGCCGGTACAAAATTCAAGAAGTCGTTGGGAAAGGAAGTTACGGTGTTGTATGTTCAGCCATTGACACACTCACCGGGGAAAAAGTGGCAATAAAAAAGATTCATGATATATTTGAGCATATATCCGATGCTGCGCGCATTCTCCGGGAAATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATCAAACATGTCATGCTGCCTCCTTCTAGGAGGGAATTTAAGGACATTTACGTTGTTTTTGAGCTTATGGAGTCGGATCTGCATCAAGTCATTAAAGCCAATGATGACTTGACAAAGGAGCACTATCAATTTTTCCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCAAGAGTCGCTTTCACCGACACACCCACAACAGTATTTTGGACGGATTATGTAGCAACAAGGTGGTATAGAGCACCGGAGCTTTGTGGATCATTTTACTCAAAGTATACTCCGGCAATCGACATATGGAGTATAGGTTGCATCTTCGCAGAAGTATTATTAGGAAAGCCGCTTTTCCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACTGATCTGCTTGGAACTCCTTCGCTTGATACTATATCCCGGGTACGCAATGATAAGGCTAGGAGATACCTAACTAGTATGCGGAAGAAGCAGCCTGTGCCATTTGCGCAGAAGTTCCCTAATGCAGATCCTTTAGGACTGCGGCTACTTGAAAGATTACTTGCCTTTGATCCAAAAGACAGGCCTACTGCTCAAGAGGCATTAGCTGATCCTTACTTCAAGGGATTAGCAAAGGTGGAGAGGGAACCTTCCTGTCATCCTATCACGAAAATGGAGTTTGAATTTGAAAGGCGAAGGGTCACAAAGGAAGAAATCCGAGAGCTAATTTTCCGTGAGATTTTAGAGTACCATCCCCAACTATTGAAAGACTACATAAATGGAACAGAGAGGGCTAATTTCCTTTATCCAAGTGCTGTTGATCAATTCAAAAAACAGTTTTCTCATCTTGAGGAAAATGGTGGCAAAAGTGGTCCAGTTATGCCACTCGAAAGAAAGCATGTATCGCTTCCAAGGTCAACGATTGTACATTCAAATATGGCAACCCAAAAAGAGCAATCGAATATCGCTTCGAGCAAAAACCGGCAACTGGCCGAGGAACAAAGAATTCCACCAGGTATGTGA 1314 0.4193 MEFFSDYGDASRYKIQEVVGKGSYGVVCSAIDTLTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHVMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFTDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLLGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLGLRLLERLLAFDPKDRPTAQEALADPYFKGLAKVEREPSCHPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYINGTERANFLYPSAVDQFKKQFSHLEENGGKSGPVMPLERKHVSLPRSTIVHSNMATQKEQSNIASSKNRQLAEEQRIPPGM 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc470g00003 437 SMART serkin_6 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc470g00003 437 MobiDBLite consensus disorder prediction 412 428 - -
Stsc470g00003 437 FunFam Mitogen-activated protein kinase 4 107 - -
Stsc470g00003 437 ProSitePatterns MAP kinase signature. 48 151 IPR003527 GO:0004707|GO:0005524|GO:0006468
Stsc470g00003 437 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 345 - -
Stsc470g00003 437 Pfam Protein kinase domain 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc470g00003 437 ProSiteProfiles Protein kinase domain profile. 13 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc470g00003 437 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Stsc470g00003 437 ProSitePatterns Protein kinases ATP-binding region signature. 19 43 IPR017441 GO:0005524
Stsc470g00003 437 Gene3D Transferase(Phosphotransferase) domain 1 99 327 - -
Stsc470g00003 437 FunFam Mitogen-activated protein kinase 99 327 - -
Stsc470g00003 437 CDD STKc_TDY_MAPK 12 349 - -
Stsc470g00003 437 Gene3D Phosphorylase Kinase; domain 1 28 350 - -
Stsc470g00003 437 MobiDBLite consensus disorder prediction 412 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc470g00003 Stsc-Chr470 10765 13990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc470g00003 1 434 MAP Kinase Gene Family AT2G42880 87.356 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Stsc470g00003 Pkinase 2.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc470g00003 - - zju:107416270 800.816