Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc470g00001 ATGCCACCATTTCACCACCAAAACAAGCCATCACCGCCATTGCATGTTTTACAGCGAGGTCGTAAGCGGCGGAGGGAAGAAGAAGAAGAAGAAAGAGAAGAAGTAGAGAGAAAGATTGAAGCATTGAAGAAGATAGTGCCAGGTGGGGAATCAGTTGAAGGAGTAGAGAAGCTGTTCGATGAAACCGCGGGTTACATACTCTCCCTTCAGTGCCAACTAAACACTCTTAGGGCTCTTGCCACTCTCTTCAACAATCTCCACCATCAAAACACCAACCTTGGAGGTTAA 288 0.4653 MPPFHHQNKPSPPLHVLQRGRKRRREEEEEEREEVERKIEALKKIVPGGESVEGVEKLFDETAGYILSLQCQLNTLRALATLFNNLHHQNTNLGG 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc470g00001 95 Coils Coil 18 45 - -
Stsc470g00001 95 MobiDBLite consensus disorder prediction 1 37 - -
Stsc470g00001 95 MobiDBLite consensus disorder prediction 20 37 - -
Stsc470g00001 95 CDD bHLH_AtIBH1_like 41 80 IPR044549 GO:0006355
Stsc470g00001 95 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 83 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc470g00001 Stsc-Chr470 4410 4697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc470g00001 6 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 32.632 3.72e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc470g00001 - - aip:107608265 116.701