Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc46g00005 ATGGTTTGCCAAGAACAAGAGGCCTTAGTCAACAAAGTGCTTGACCTCTACCACAAGATCTCTACCTTAGACACCCTCAAACCCTCCAAAGCTGTTGACACCCTCTTCACCCAACTCGTTCACACATGCATCCCTCATACCCCTTTCATCGACATCACTAAACTCCCCACAACTATCCAAGAAGCCAGATCTAACCTAATCCGCCTCTGCGGCGAAGCCGAATCGCTCTTGGAGACACATTATTCGACGCTTTTAGTTTCATCATTCTCCAACGAGAATCCGCTTGGACATCTTCATGTCTTCCCCTACTACTCCAACTACCTCAAACTTAGTCGCCTTGAATTTAACATTCTTAGTCAACACTTTCAGGCGGTCCCCACGAAGATTGCCTTCGTTGGATCTGGCCCGCTTCCCTTAACCTCGATTGTTTTGGCTACCAACCATTTTTCCAACACAACATTTCATAATTATGACATCGACGCTTTGGCCAATTCCATGGCCAAGGCATTGGTGTCCTCGGATCTTGACCTGTCAAAGCGCATGGTCTTTCATACCACCAACATACTAGATGTGTCTCATGGTTTGGACGAGTTTAACGTTGTTTTCTTGGCTGCACTCGTAGGAATGGAAAATGAGGAGAAGAAGAAGGTGATCGACCATCTGGGTAAGTACATGGCACCTGGAGCACTTCTGATGGTAAGAAGTGCTCATGGTGCCAGGGCATTTCTATATCCAGTGGTCGATCTTTCTTCTGATCTCGAAGGATTCGAGGTTTTATCTGTGTTTCACCCCTCCGATGAGGTTATCAATTCAGTTGTGATTGCGCGAAAATGTCCAATTATTGCAACTGCATCGTTGTCCACTGAGCAAGGATTTGATGGTGTTGGATCAATGGCGATGCATAACAAACGTTCTGAAGAGATTCAATCGGTGTTCATCAGTAACAATAACCATTATAATAATGGGAACGTGATTGAATAA 981 0.4506 MVCQEQEALVNKVLDLYHKISTLDTLKPSKAVDTLFTQLVHTCIPHTPFIDITKLPTTIQEARSNLIRLCGEAESLLETHYSTLLVSSFSNENPLGHLHVFPYYSNYLKLSRLEFNILSQHFQAVPTKIAFVGSGPLPLTSIVLATNHFSNTTFHNYDIDALANSMAKALVSSDLDLSKRMVFHTTNILDVSHGLDEFNVVFLAALVGMENEEKKKVIDHLGKYMAPGALLMVRSAHGARAFLYPVVDLSSDLEGFEVLSVFHPSDEVINSVVIARKCPIIATASLSTEQGFDGVGSMAMHNKRSEEIQSVFISNNNHYNNGNVIE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc46g00005 326 Gene3D Vaccinia Virus protein VP39 5 279 IPR029063 -
Stsc46g00005 326 PANTHER NICOTIANAMINE SYNTHASE 3 4 286 IPR004298 GO:0030410|GO:0030418
Stsc46g00005 326 Pfam Nicotianamine synthase protein 4 278 IPR004298 GO:0030410|GO:0030418
Stsc46g00005 326 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 282 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc46g00005 Stsc-Chr46 48319 49299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc46g00005 1 291 Nicotianamine Synthase Gene Family AT5G04950 60.825 1.77e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc46g00005 K05953 - jre:108987758 388.267