Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc469g00006 ATGCACAAAGATCCCATATTTTGGCGAGATAATATTGCCCATTTTGAAGAGAATGACTTCCAGATTATAAGGGTCCTAATAACAATTTTGGACACTGCTCGTGATCCAAGGACATTGGCTGTTGCTTGCTTTGACCTTTCGCAGTTCATCCAGCACCATCCTTCAGGGCGTCTCATTGTGGCAGACCTCAAGGCTAAGGAACGAGTAATGAAACTAATGAATCATGAGAATGTTGAAGTTACTAAGAATGCACTGCTCTGCATCCAAAGACTTTTCTTAGGTGCAAAGTATGCCAGCTTCTTGCAAGCTTAG 312 0.4231 MHKDPIFWRDNIAHFEENDFQIIRVLITILDTARDPRTLAVACFDLSQFIQHHPSGRLIVADLKAKERVMKLMNHENVEVTKNALLCIQRLFLGAKYASFLQA 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc469g00006 103 SUPERFAMILY ARM repeat 1 93 IPR016024 -
Stsc469g00006 103 Gene3D - 1 95 IPR038497 -
Stsc469g00006 103 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 102 IPR004908 GO:0000221|GO:0046961|GO:1902600
Stsc469g00006 103 Pfam V-ATPase subunit H 1 92 IPR011987 GO:0000221|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc469g00006 Stsc-Chr469 39887 41501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc469g00006 1 103 Primary Pumps ATPases(2) AT3G42050 79.612 8.03e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc469g00006 K02144 - qsa:O6P43_024716 193.741