Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc468g00001 GTAGGACTAGTAATGGGGAATGTAGCTTTCTTGCGCAAATTGTACATGGAGTTCAACACTACCTTTGTGTTCATCATAGATTTTGGTATGATGTGTTACATGTTTGCTTTGGGGATAGAAATGGATCCATTCATACTGTTCAAGAAACCAAGTAAGGATGCTCAAGTTGCATATGCAGGAATAATTTTCACCTTCATCATAGCATGCACCACAACACCATTCCTGAGTTACTTTACAGATCAAACCAAGTTGCTAGAATACACATTCTCCCTCTCAACTCTTCTATCTAGCACAGCGTCTCCGGTTTTGACTCGCCTGATAACGCGCCTCAAGATAGGCAAGTCGGATATCGGGAAGCTTGTGATAGCAACAGGGATGCACTCGGATTTCGTATGCTCCTTGCTTCTTTCGGTTGGCTACATAGCCATGCCAATAGACACATTTTGCAATGATTATGATCAAAAGAAGCGCCTTAAGAAGGCCATCATAATGGGGTGTGCACTTCTTGGACAGACAGTGTTAACAGCATTGGTTTCACCAATTTTTATGAGCTGGGTTGATAATGAAAACCCAGAAGGAAGACCTATGAAAGGTTCACATTTGGTGTTGTCAATTGCAGTTATGGTCATGGCTTGTGCCTCATCAACCATATATGAATATAGTCCAATTCTAAGTGCTTTCATGGCAGGGGTGTGTTTTCCAAGGGAAGGCAGGGTTTCCAAATGGGTTATTGCCAAAATCAACTACATGTTGACCACTATCTTCTTTCCCATCTTTTTCTTGTGGATGGGTTATGCAGCTGATTTCAGAGAGTTTGATGCTGGACATCTATTGACTTGGGCAAAATTATTTATACTTATCTTCATTGCCATTGTCAGCAAGGTCGTCGGAACGGTTATTTATGGGATGATACTCGGCTTTCGCTGGCCGGAATCAGTTGCAATTGGATTGCTCCTCACCACCAAGGGCCATTTTCACATCTTCTTGGCTGTCAAAGTGGCAAGTATTTTCCTAACTTTTTCTTTATCTTCACATATCATAAAGATAGGTTGTGGTGCCAATACTTCAACTGGCATTACCATGGTCATGGCAATATTTTTCACAATAGTGCATACCCCATCAGTTATAGCTTACATCATAAAGCGTGCGAAGAAACGAGCGCCAAATCATCACATGACGCTCCAATTGCTTGACCCACTACATGAGCTAAGGATGCTCTTGTGTGTCCATGGACCTGACAACGTTCCGGCTTCCATCAACTTCATGGAGATCTCAAGAGGGGCAACACCCCCTGGCATTGTGGTATATGTAGCAGACATGATTGAACTCACTGATCAGATAGCAGAGACAGTAGAGAGAGGCGCGGATGGACGTACAACGGCTGTGAAAGATGCTGCGACGGTGGAAATGAGAGACAAAGTAACCAACTCTTTTCAAGACTATGTAGATGAGAATAGTGAAAGTATTACTCTCAAAAGAACATTAGCAGTGTCAACAGTCACTAACATGGCACAAGACATCTGTGTCTTAGCAGATGAATTGATGATTGCCCTCATTATACTACCATTCCACAGGAACCAACGTCAGGATGGAAAATTTGATATGGGCCACCAGGGATTCAGATATGTGAACAGAAAGTTATTAAGGAGTGCTCCTTGTTCCGTGGGGATTCTAGTTAACAGAGGCCTTGGATCAATTGAAAAGATATCAAGAACTCAGGTATCACTGAATGCGGCAGTAATATTCATTGGTGGAAAAGATGATAGGGAAGCACTTGCCTATGCAGGTATGGTAGCGAAACATCCGGGAGTGAAACTCACAGTGATCAGATTTCTGGTAGATTCCAGTGCAGAATCCTCGAGATTAGCGGCTTATAGGGTCAACCTTCCAGAGCCGGAGGACGAAGTGGGGCATGACGACGAATGTTTTGCACAATTCTACGAAAAGTATATAAATGGGGGTCGAATTTCCTACTTAGAGAAGCATCTTGCAAATGCGGCAGAGACATTCACAACTCTCAGATCATTTGAAGGGCAATACTCATTGGTCATTGTAGGAAAAGAAGGAGGGATGAACTCTATATTGACAAAAGGGATGGACGATTGGCAACAGTGCCCAGAATTGGGACCAATTGGGGATGTACTTTCAGGACCAGATTTCTCAATGACAGTGTCTGTGTTGGTAATCCAACAACATAGACTCAAAGGAGAAATAGATGGTCTTGATGAAGACTTCTCCATCATGTAG 2247 0.4286 VGLVMGNVAFLRKLYMEFNTTFVFIIDFGMMCYMFALGIEMDPFILFKKPSKDAQVAYAGIIFTFIIACTTTPFLSYFTDQTKLLEYTFSLSTLLSSTASPVLTRLITRLKIGKSDIGKLVIATGMHSDFVCSLLLSVGYIAMPIDTFCNDYDQKKRLKKAIIMGCALLGQTVLTALVSPIFMSWVDNENPEGRPMKGSHLVLSIAVMVMACASSTIYEYSPILSAFMAGVCFPREGRVSKWVIAKINYMLTTIFFPIFFLWMGYAADFREFDAGHLLTWAKLFILIFIAIVSKVVGTVIYGMILGFRWPESVAIGLLLTTKGHFHIFLAVKVASIFLTFSLSSHIIKIGCGANTSTGITMVMAIFFTIVHTPSVIAYIIKRAKKRAPNHHMTLQLLDPLHELRMLLCVHGPDNVPASINFMEISRGATPPGIVVYVADMIELTDQIAETVERGADGRTTAVKDAATVEMRDKVTNSFQDYVDENSESITLKRTLAVSTVTNMAQDICVLADELMIALIILPFHRNQRQDGKFDMGHQGFRYVNRKLLRSAPCSVGILVNRGLGSIEKISRTQVSLNAAVIFIGGKDDREALAYAGMVAKHPGVKLTVIRFLVDSSAESSRLAAYRVNLPEPEDEVGHDDECFAQFYEKYINGGRISYLEKHLANAAETFTTLRSFEGQYSLVIVGKEGGMNSILTKGMDDWQQCPELGPIGDVLSGPDFSMTVSVLVIQQHRLKGEIDGLDEDFSIM 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc468g00001 748 Gene3D - 1 389 IPR038770 -
Stsc468g00001 748 PANTHER CATION/H + ANTIPORTER 18 733 - -
Stsc468g00001 748 Pfam Sodium/hydrogen exchanger family 2 375 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc468g00001 Stsc-Chr468 1489 4526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc468g00001 1 748 Antiporter Super Family AT3G52080 48.168 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc468g00001 K26731 - gmx:100815945 1031.17