Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc464g00001 ATGGCTTCAAAATTTGAGGGTAGAGCCTATCTCTCTTCCTTTGTTGATGCTGTTTTGAACAAACTGTCTTCACTTGATGACAACTCAACTCCAATGGGATGGAAGCTAGCTGACCAGAGCTTGCTTCAGAGTCTGGAGAAGAGTCTCCTTCACGTTCGACCTGTGCTTGATGATGCTGAGCAGAAGCAGATCAAAGACCAAGAGGTGAAGAAATGGCATGTTGATCTCCAAGATGCTCTCTATATGGCTGATGACTTGCTAGATGAACTCTCCACCAGAGCTGCCACTGCCACTCCCACTCCAGGTAATCATTCTTCCTGGTGTGACTCCGTCGTTGATTCAATGGTGCAAGGTAATGATGATAGTGAGAAGATGCGAGCCGTAGTTGTCAAACTAGAGTTTATTGTTGAAAAGAAAAATGTACTTCGACTAAAACAAGAGCCTGTCAAAGATCTAACAGACATGTCATGGAGAAATCAATCATCTCTGGTTGAAAGTTCTGACATATTCGGAAGGGATAATGACAAGGAAGCCATCATAGAATTGTTGTTAGATGATACTCGTGATGCTAACATATCTGTGATCCCCATTGTGGGCATGGGCGGAGCTGGAAAAACTACTTTAGCTCAGCTGGTTTACAGTGATGCCAGAGTGGAGGAGAAATTTGATAATAAAGCATGGGTGTGCGTTTCGGACGATTTTGACGTTTTAAAGGTTACAAAGACGTTAATAAAAGCAATAGGTGGTAGTTCTTGTAATGAGGATGATTTAAATTTACTTCAAACAGAGTTGAAGGATAAGTTAATGGGGAAGAAATTCTTGATTGTTTTGGATGATGTGTGGATTGATATTTCCAAACACTGGAAAACTCTTCAAAAACCTTTTCAATATGGAAAAAAGGGGAGCAAGGTACTTGTAACAACTCGTGACAATAATGTTGTTGATGTAGTGAAGCCTATTTCAACTTACACGCTTGCTTTATTGTCCGAGAAAGATTGTTGGTCACTTTTTGTGAAACATGCACTTCTTTCTCCTGAATCGATGGAGTATTCAACTCTGGAACCCGTTGGTCGAGAACTTATCAAAAAGTGCAAAGGGCTACCTTTGGCCGTAGAGTCACTTGGTGCCTTATTTCGAGCAACTAACTACAATGAAAGGGATTGGGATAATGTATTGAAAAGTGAACTATGGGAAGTTTTCGAAGATCAGAAGAATGACGAGATGATTCCTGCTTTAAGAATCAGCTATTACTACCTTCCTTCAAATCTCAAGCGATGTTTCGTTTATTGCTCTTTGTTTCCAAAAGATTATGAATTTGATAAAGATGAGCTGGTCTTGCTATGGATGGCAGAAGAGCTTTTACAACCAAAAGGGAAAAAGACTCCAGAGGAAATTGGTTGTGAATATTTCGATGAATTGGTTGCGAGGTCCTTTTTTCAGTTCTCTAGAACTCATGACGGGCTCTATGTGATTCATGATATCATGCATGATTTGGCAACAATTTGTGCTGGAGAATTCCATTTTAGAGCTGAAAAAGTAGAGGAGAATAACAGGATCAGCAATAAAACTCGCCATTTATTGCATAACTCAAGAGGAAATTATCCCTTCTCACAACTTGTGGCAGCTTGTGATAGGGTAAAAGATGTGAGGACACTTCTTGAAATAAATTTGGGTCCAATGGATCCTTTCAATATGAAAAGTGCTCCTCATATGTTTTCATCACAACTGAAGTGCTTAAGAGTATTGTCATTTAATAGCTTTCCTCTTTATTCATTACCCGATTCAATAGGTGAATTGATTCATTTGCGTTATTTGAATCTCTCATATACGCATATATCAACATTGCCTAAGGAATTGTGTAATCTGTACAATCTCCAGACGTTGAAGTTAAAGGATTGTAAGTTTCTAAAGAAGCTACCCAACAATATGCAAGATCTTGTAAATTTACGTCATCTTGATATTGAAGGAACTGGTCTTGAAGAGATGCCAAAAGGAATAAGCAAATTGAAGAATTTGCAATTTTTAAGTGACTATATTGTCGGCAGGCATGAAAAGAATAATGGAATTGAAGAATTAGGAGCTCTTGCCAATATTCATAAGAGGCTTCAGATTTCCCAGTTAGAGAATATCATTAATGGTGATCAAGCTTGGAAGGCTAGAATAGCTGAGAAGAAGAACATTAGGGGTCTAAGTTTGACTTGGTCATGGAACAACCATACGGTTGATTCTCAAGATATAATCAACAATTTAAGGCCTCACACAAACTTGAGAAAGCTATCAATCCATGAGTACAAGGGTCAAAAATTTCCAAATTGGTTAGGACATTCTTCCTATAGAAATATGACCGAAATGTATTTGAGTGGGTGCAACAATTGTTTTGAGCTTCCTTCACTTGGACAGCTACCCTCTTTGAAGCACTTGCAGCTGAGCAACTTTTGCAAGCTAGCTCGCATTGGTGCGGAGTTTTACAGAGATGGTGATGAATCTTCTTCTTGTGGGGTACCCTTTCCAATGCTTGAAACTCTGAGCTTTCATGCAATGGGTTGCTGGGAGGAGTGGCTTACAGTTTCATCTGAGTTGGATGCTTTTCCTCGGCTTAGGGTGCTTACATTGCGATACTGTCCTGCATTAAGGGGAGATTTACCCAGCCAACTACCTACATTGGAAAGGCTTTGCATTGGTCTTTGTGACAAACTTGCTTTTACTCTCCCAAGAGAACATGCAGTGCTCGAGTTATCTGTTGAAGGACCCCAAGTAGTGAAGGCCATGTTTGAGGCCATTGCATGCAACCAACTAAACTCTCTACAATCTTTAAGCATCTCAGGATGTTCTTCGTCCATATTATTTCCTGAAATATGTTTGCCTTCTTCATTACAAAACTTGGAAATTGTCAATTGTCCACATCTGGAGTTCCCGATGCTGCCGCCGCATCACGAGTCGTTACAATTGGTATCAATAGACGACAGTTGTTATTCACTCGCGTCCTTCCCTTTTGCAAGCTTTCCAAATCTCACTGAACTCAAAATTTCATCCTGTGAAAATATGAGGACTCTTGCGGCATCAGATCATACTACTGCTTCAACTTCAACCTCAAGTCTCCGCTCTTTAAGAATCATGAACTGCCCTAGACTTGAGTCTTTCCAGATGGTTGCACCCCATCTAGAGGATCTTTCTGTAGGATATTGCCCAGAACTTGAATTGTTTTTTGAAGGGGGTTTGCCACCTAACCTGAGAGAGCTTCGAATCCGATATTGCAAGAAGCTGGTGAGGTACCTAGCATCCATGGACTTGTCTGATCACTGTCTTACTCATCTTGACATATGGCATCCTTATGATAACATCAATTCCTTCCCCATCGACGGTTGCCTGCCACCCTCCCTTGAGACTCTCTGTCTGCGATGCTTTCCAAGTCTAGAAATCTTAGACTGCAAGGGGCTTGACTATCTTCAGCAGCTAGCGATAGACCATTGTCCCAACCTGCATGATGTCGTGGGGAAGAGCTTTCCTACCTCTCTGTCGATTCTCTACTTCGATGGAGATTCTTTGCTGAAAGAACGGGTGCAGATGATGGACCCTCATATCTTGTCCAAAATGTCCCACGTGCGCAACATCCATATTGAATAG 3624 0.4084 MASKFEGRAYLSSFVDAVLNKLSSLDDNSTPMGWKLADQSLLQSLEKSLLHVRPVLDDAEQKQIKDQEVKKWHVDLQDALYMADDLLDELSTRAATATPTPGNHSSWCDSVVDSMVQGNDDSEKMRAVVVKLEFIVEKKNVLRLKQEPVKDLTDMSWRNQSSLVESSDIFGRDNDKEAIIELLLDDTRDANISVIPIVGMGGAGKTTLAQLVYSDARVEEKFDNKAWVCVSDDFDVLKVTKTLIKAIGGSSCNEDDLNLLQTELKDKLMGKKFLIVLDDVWIDISKHWKTLQKPFQYGKKGSKVLVTTRDNNVVDVVKPISTYTLALLSEKDCWSLFVKHALLSPESMEYSTLEPVGRELIKKCKGLPLAVESLGALFRATNYNERDWDNVLKSELWEVFEDQKNDEMIPALRISYYYLPSNLKRCFVYCSLFPKDYEFDKDELVLLWMAEELLQPKGKKTPEEIGCEYFDELVARSFFQFSRTHDGLYVIHDIMHDLATICAGEFHFRAEKVEENNRISNKTRHLLHNSRGNYPFSQLVAACDRVKDVRTLLEINLGPMDPFNMKSAPHMFSSQLKCLRVLSFNSFPLYSLPDSIGELIHLRYLNLSYTHISTLPKELCNLYNLQTLKLKDCKFLKKLPNNMQDLVNLRHLDIEGTGLEEMPKGISKLKNLQFLSDYIVGRHEKNNGIEELGALANIHKRLQISQLENIINGDQAWKARIAEKKNIRGLSLTWSWNNHTVDSQDIINNLRPHTNLRKLSIHEYKGQKFPNWLGHSSYRNMTEMYLSGCNNCFELPSLGQLPSLKHLQLSNFCKLARIGAEFYRDGDESSSCGVPFPMLETLSFHAMGCWEEWLTVSSELDAFPRLRVLTLRYCPALRGDLPSQLPTLERLCIGLCDKLAFTLPREHAVLELSVEGPQVVKAMFEAIACNQLNSLQSLSISGCSSSILFPEICLPSSLQNLEIVNCPHLEFPMLPPHHESLQLVSIDDSCYSLASFPFASFPNLTELKISSCENMRTLAASDHTTASTSTSSLRSLRIMNCPRLESFQMVAPHLEDLSVGYCPELELFFEGGLPPNLRELRIRYCKKLVRYLASMDLSDHCLTHLDIWHPYDNINSFPIDGCLPPSLETLCLRCFPSLEILDCKGLDYLQQLAIDHCPNLHDVVGKSFPTSLSILYFDGDSLLKERVQMMDPHILSKMSHVRNIHIE 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc464g00001 1207 FunFam Probable disease resistance protein At1g63360 416 501 - -
Stsc464g00001 1207 SUPERFAMILY RNI-like 855 1172 - -
Stsc464g00001 1207 PRINTS Disease resistance protein signature 267 281 - -
Stsc464g00001 1207 PRINTS Disease resistance protein signature 364 378 - -
Stsc464g00001 1207 PRINTS Disease resistance protein signature 930 946 - -
Stsc464g00001 1207 PRINTS Disease resistance protein signature 194 209 - -
Stsc464g00001 1207 PANTHER DISEASE RESISTANCE PROTEIN RP 42 854 IPR044974 GO:0006952
Stsc464g00001 1207 Pfam NB-ARC domain 173 416 IPR002182 GO:0043531
Stsc464g00001 1207 Gene3D - 15 128 - -
Stsc464g00001 1207 Pfam Rx N-terminal domain 14 100 IPR041118 -
Stsc464g00001 1207 Gene3D - 415 501 IPR036388 -
Stsc464g00001 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 430 IPR027417 -
Stsc464g00001 1207 Gene3D Ribonuclease Inhibitor 541 919 IPR032675 -
Stsc464g00001 1207 Gene3D - 153 321 IPR027417 -
Stsc464g00001 1207 Gene3D - 327 414 IPR042197 -
Stsc464g00001 1207 FunFam Probable disease resistance protein At1g61300 154 319 - -
Stsc464g00001 1207 Gene3D Ribonuclease Inhibitor 925 1188 IPR032675 -
Stsc464g00001 1207 SMART LRR_typ_2 599 622 IPR003591 -
Stsc464g00001 1207 SMART LRR_typ_2 801 825 IPR003591 -
Stsc464g00001 1207 SMART LRR_typ_2 646 669 IPR003591 -
Stsc464g00001 1207 SUPERFAMILY L domain-like 491 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc464g00001 Stsc-Chr464 537 6113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc464g00001 191 375 WRKY Transcription Factor Family AT5G45050 27.895 8.92e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc464g00001 - - aip:107625739 1638.62