Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc455g00005 ATGGAACTCGTTATTGGTACAGCGGATGCATCAGAATCGTTTGAACAGTACACGTGTGACGTTAAAGAAGAATATGTCCCCAAGGTTGGAATGACTTTTGAAACAGTTGTTGAAGTTGAGTTGTTCTATAAAGCGTATGCGAAACGTGCAGGCTTCTCTACAAAGATAAGGAACTCAAATAGGTGTAAGGAAGCCAAGGAAATAAAGAATCAACTAATAACTTGCAATAGAGAAGGGAGATGGAGATCTGAAGTACCCTCTGTAGAGAAGACGAACCCAATATGTGGTGCAAATTGCCCTGTACGATTTTATGTGCACGTAGACAAGAAGACTCGACTTTAG 342 0.4064 MELVIGTADASESFEQYTCDVKEEYVPKVGMTFETVVEVELFYKAYAKRAGFSTKIRNSNRCKEAKEIKNQLITCNREGRWRSEVPSVEKTNPICGANCPVRFYVHVDKKTRL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc455g00005 113 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 109 - -
Stsc455g00005 113 Pfam FAR1 DNA-binding domain 42 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc455g00005 Stsc-Chr455 19382 20115 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc455g00005 FAR1 1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc455g00005 - K17604 aip:107614666 117.087