Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc453g00003 ATGGGTCCTGAGGAGGAAGCACGGGTAGAGGAGCAGCTGAGGAGTGAGCGTTTGGCTAACTTGGTTGGGTGTTGCTATGAAGGAGAAGAGAGGCTGCTAGTGGTAGAGTTTATGCCCAATGAAAAACTCTCCAAACACCTCTTTCACTGGGAGTCCCAGCCCATGAAATGGGCAATGAGGCTGAGAGTTGCCTTGTATTTAGCTCAAGCATTGGAATAA 219 0.4932 MGPEEEARVEEQLRSERLANLVGCCYEGEERLLVVEFMPNEKLSKHLFHWESQPMKWAMRLRVALYLAQALE 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc453g00003 72 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 5 72 IPR045845 GO:0004672|GO:0009742
Stsc453g00003 72 SUPERFAMILY Protein kinase-like (PK-like) 5 72 IPR011009 -
Stsc453g00003 72 Pfam Protein tyrosine and serine/threonine kinase 5 72 IPR001245 GO:0004672|GO:0006468
Stsc453g00003 72 Gene3D Transferase(Phosphotransferase) domain 1 4 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc453g00003 Stsc-Chr453 7423 7992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc453g00003 6 71 Receptor kinase-like Gene Family AT5G10530 39.394 4.42e-11 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Stsc453g00003 PK_Tyr_Ser-Thr 3.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc453g00003 - - gmx:100804210 125.946