Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc449g00001 ATGAAAGTGGGATTTGTTATCAAGATTAGGAATACAAATCATGTTAAGAATGATAAGGGTGAGAAGATTCTAATTAATCAGTCAATCCATTGTAACCGAGAGGGTAATCGCATGTCACAAGCGAAGGCACCAAGAAGATCGAAGAAGATTGCGGCTGCAATGTGCAATGCAAGGGTTTATGTCAAGTTTAACAAAGACAATAGTAAATGGTTTTACTCGATAGTTGAAGGAAAGCACTCACATTATTGCTCTCCTAAGAAATCCATTCAATATCATGATTACATGCACTTGAGTATGTATGCCAAATGCGTCATTGAAGACAAGGATGAAGCTGACATCTGA 342 0.3743 MKVGFVIKIRNTNHVKNDKGEKILINQSIHCNREGNRMSQAKAPRRSKKIAAAMCNARVYVKFNKDNSKWFYSIVEGKHSHYCSPKKSIQYHDYMHLSMYAKCVIEDKDEADI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc449g00001 113 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 111 - -
Stsc449g00001 113 Pfam FAR1 DNA-binding domain 2 83 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc449g00001 Stsc-Chr449 7202 7543 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc449g00001 FAR1 9.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc449g00001 - - ahf:112729978 126.716