Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc447g00009 ATGGAAGAGGCAAACAATGGAAGCAAGGTCAAGATTGGTGTTGCAATTGGAGGCACTACTGTTGCCTTATTATGTGTGCTTCTCTTAGTTCTGTATTTCATATATATAAGAGGACGTGGCAAGATGAAAAAGAATGCAGCAGCAGTAGTAGATCACTTCAAGGAAGAAGATTTGGAGCTTCCATTGTTTGACCTATCAACTATAGCTGGCGCTACAAACAACTTTACAATCAACAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAACAATGGAAAATGGACAAGAAATTGCTGTGAAGACACTTTCTAGAAGCTCTGGCCAAGGGCTCAAAGAATTTAAGAATGAAATTGTTTTAATAGCCAAACTTCAGCATCGTAATCTTGCTTGGGATTTATGGAGAGAAGGGAGGCATGTAGAAGTAATTGATGAATACCTGAAAGGTGATCTCTCTGAAGCACTGCGGTGTGTTCATATAAGTCTCCTTTGTGTGCAGGAGCATGCACATGATAGGCCAAACATGTCATCAGTGGTTATGATGTTAGGCAGTGAAATTAGCTTGGAGATCATTCATATCATCAACAACATCCTTCATCTCTCAACGAATTAA 618 0.3997 MEEANNGSKVKIGVAIGGTTVALLCVLLLVLYFIYIRGRGKMKKNAAAVVDHFKEEDLELPLFDLSTIAGATNNFTINNKLGEGGFGPVYKGTMENGQEIAVKTLSRSSGQGLKEFKNEIVLIAKLQHRNLAWDLWREGRHVEVIDEYLKGDLSEALRCVHISLLCVQEHAHDRPNMSSVVMMLGSEISLEIIHIINNILHLSTN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc447g00009 205 ProSiteProfiles Protein kinase domain profile. 75 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc447g00009 205 Gene3D Phosphorylase Kinase; domain 1 36 133 - -
Stsc447g00009 205 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 132 186 - -
Stsc447g00009 205 SUPERFAMILY Protein kinase-like (PK-like) 59 160 IPR011009 -
Stsc447g00009 205 Pfam Protein kinase domain 76 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc447g00009 Stsc-Chr447 38950 40462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc447g00009 135 195 Receptor kinase-like Gene Family AT4G23190 39.062 1.34e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc447g00009 Pkinase 3.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc447g00009 - - adu:107459409 187.963