Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc447g00007 ATGGCTCCGGAGTATGCTGTTAATGGACAATTTTCGATAAAATCTGACGTTTTTAGCTTTGGTATTTTACTGCTTGAGATTGTGTCGGGAAAGAAAAACAGAAAATTGTATTATGCAAGTGATGACAATAATGTTGTTAGCTTGTATGGAAACGCATGGGATCTATGGAAGCAAGGAAGGTCAATGGAGTTGGTGGATGAATGCCTCAAAGATTCATGGAATGTTTGTGAAGTACAACGTTGTATTCACATTGGTCTCCTATGTGCACAGCAATATCCCCATGATAGACCAACAATGTCTTCTGTGGTTTTAATGCTGGGAAGTGAAATTGATTTGCCTCAACCCAAAGCTCCTACATTTTTCATTTGTGAACCTTTTTATGGTTCAAGTTCCTCCACAACTTGTAAAAACGAATTAAGCATTTCAGAGATGGAACCTCGATAA 444 0.3806 MAPEYAVNGQFSIKSDVFSFGILLLEIVSGKKNRKLYYASDDNNVVSLYGNAWDLWKQGRSMELVDECLKDSWNVCEVQRCIHIGLLCAQQYPHDRPTMSSVVLMLGSEIDLPQPKAPTFFICEPFYGSSSSTTCKNELSISEMEPR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc447g00007 147 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Stsc447g00007 147 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 141 - -
Stsc447g00007 147 Pfam Protein tyrosine and serine/threonine kinase 1 80 IPR001245 GO:0004672|GO:0006468
Stsc447g00007 147 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc447g00007 147 SUPERFAMILY Protein kinase-like (PK-like) 1 124 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc447g00007 Stsc-Chr447 35691 36303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc447g00007 1 147 Receptor kinase-like Gene Family AT4G23150 44.937 3.80e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc447g00007 PK_Tyr_Ser-Thr 3.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc447g00007 - - aip:107610641 236.498